BLASTX nr result

ID: Glycyrrhiza24_contig00026084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026084
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity ...   158   4e-37
ref|XP_003556883.1| PREDICTED: chromosome transmission fidelity ...   155   4e-36
ref|XP_002518124.1| chromosome transmission fidelity factor, put...   135   4e-30
ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity ...   125   4e-27
emb|CBI38383.3| unnamed protein product [Vitis vinifera]              125   4e-27

>ref|XP_003535216.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Glycine max]
          Length = 966

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/90 (90%), Positives = 83/90 (92%)
 Frame = -1

Query: 272 VLLKMISAERKPDAGKQSLDKGQLERKSSKKGRKTVSLSRPVICICNDLYAPALRPLRQV 93
           VLLKMIS+ERKPDAGKQSL KGQ ERKSSKKG KT SLSRPVICICNDLYAPALRPLRQV
Sbjct: 415 VLLKMISSERKPDAGKQSLGKGQQERKSSKKGSKTASLSRPVICICNDLYAPALRPLRQV 474

Query: 92  AKVLAFVQPTVSRVVSRLKYICNKEGMKAS 3
           AKV  FVQPTVSRVV+RL YICNKEGMKAS
Sbjct: 475 AKVHIFVQPTVSRVVNRLTYICNKEGMKAS 504


>ref|XP_003556883.1| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Glycine max]
          Length = 959

 Score =  155 bits (391), Expect = 4e-36
 Identities = 79/90 (87%), Positives = 81/90 (90%)
 Frame = -1

Query: 272 VLLKMISAERKPDAGKQSLDKGQLERKSSKKGRKTVSLSRPVICICNDLYAPALRPLRQV 93
           VLLKMIS+ERKPDAGKQS  KGQ ERKSSKKG K  SLSRPVICICNDLYAPALRPLRQV
Sbjct: 409 VLLKMISSERKPDAGKQSFGKGQQERKSSKKGSKAASLSRPVICICNDLYAPALRPLRQV 468

Query: 92  AKVLAFVQPTVSRVVSRLKYICNKEGMKAS 3
           AKV  FVQPTVSRVV+RL YICNKEGMKAS
Sbjct: 469 AKVHIFVQPTVSRVVNRLTYICNKEGMKAS 498


>ref|XP_002518124.1| chromosome transmission fidelity factor, putative [Ricinus
           communis] gi|223542720|gb|EEF44257.1| chromosome
           transmission fidelity factor, putative [Ricinus
           communis]
          Length = 813

 Score =  135 bits (339), Expect = 4e-30
 Identities = 69/91 (75%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
 Frame = -1

Query: 272 VLLKMISAERKPDAGKQSLDKGQLERK-SSKKGRKTVSLSRPVICICNDLYAPALRPLRQ 96
           V+LKM+SAERK + GK+++ KG    K S+KKGRKTVSLSRPVICICNDLYAP LRPLRQ
Sbjct: 409 VILKMVSAERKSNTGKENVAKGDQSGKISAKKGRKTVSLSRPVICICNDLYAPVLRPLRQ 468

Query: 95  VAKVLAFVQPTVSRVVSRLKYICNKEGMKAS 3
           VAKV  FVQPTVSRVV+RLK+IC KEGMK S
Sbjct: 469 VAKVHIFVQPTVSRVVNRLKFICKKEGMKVS 499


>ref|XP_002265379.2| PREDICTED: chromosome transmission fidelity protein 18 homolog
           [Vitis vinifera]
          Length = 948

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/94 (72%), Positives = 75/94 (79%), Gaps = 4/94 (4%)
 Frame = -1

Query: 272 VLLKMISAERKPDAGKQSLDK----GQLERKSSKKGRKTVSLSRPVICICNDLYAPALRP 105
           V+LKM+S ERK D  K ++ K    GQ+   SSKKG KT SLSRPVICICNDLYAPALRP
Sbjct: 400 VILKMVSTERKADNRKGNVAKVDESGQI---SSKKGHKTASLSRPVICICNDLYAPALRP 456

Query: 104 LRQVAKVLAFVQPTVSRVVSRLKYICNKEGMKAS 3
           LRQVAKV  FVQPTVSRVVSRLKYICN EG+K +
Sbjct: 457 LRQVAKVHIFVQPTVSRVVSRLKYICNMEGLKTN 490


>emb|CBI38383.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  125 bits (314), Expect = 4e-27
 Identities = 68/94 (72%), Positives = 75/94 (79%), Gaps = 4/94 (4%)
 Frame = -1

Query: 272 VLLKMISAERKPDAGKQSLDK----GQLERKSSKKGRKTVSLSRPVICICNDLYAPALRP 105
           V+LKM+S ERK D  K ++ K    GQ+   SSKKG KT SLSRPVICICNDLYAPALRP
Sbjct: 500 VILKMVSTERKADNRKGNVAKVDESGQI---SSKKGHKTASLSRPVICICNDLYAPALRP 556

Query: 104 LRQVAKVLAFVQPTVSRVVSRLKYICNKEGMKAS 3
           LRQVAKV  FVQPTVSRVVSRLKYICN EG+K +
Sbjct: 557 LRQVAKVHIFVQPTVSRVVSRLKYICNMEGLKTN 590


Top