BLASTX nr result

ID: Glycyrrhiza24_contig00026072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026072
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|2...   229   7e-58
ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein lig...   227   2e-57
emb|CBI30594.3| unnamed protein product [Vitis vinifera]              227   2e-57
ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|2...   223   5e-56
ref|XP_002509447.1| ring finger protein, putative [Ricinus commu...   214   2e-53

>ref|XP_002305782.1| predicted protein [Populus trichocarpa] gi|222848746|gb|EEE86293.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  229 bits (583), Expect = 7e-58
 Identities = 135/272 (49%), Positives = 165/272 (60%), Gaps = 15/272 (5%)
 Frame = -3

Query: 789 NFDALIAALYPDIDKYEEQELALQEDEKTHNKQIQASIAQTLHRQTEA-SSKKRNAKATA 613
           N+DALI+ALYPDIDKYEE+ELA QE+EK  NKQIQA+IAQT HRQ EA S KK  AK TA
Sbjct: 144 NYDALISALYPDIDKYEEEELAFQEEEKARNKQIQATIAQTFHRQAEALSRKKTTAKVTA 203

Query: 612 MAFLRRSQGNYRTSHLRRRRNIRNTG-QVSXXXXXXXXXXXXXXXXXXDEQMETKPSGCK 436
            AF RR+   +R +H R RRN R  G Q S                  +   E KP  CK
Sbjct: 204 AAFARRTPSRFRDAHSRGRRNYRMAGFQGSDDNEDANGDGGKDSSSADEHSAEVKPKRCK 263

Query: 435 RGEQETQFPQHSAITDPDGTGDENIQEVNRE-------IMSASGTLAWGKNGQRSNNRV- 280
           +          SA  + DG GDEN  EVN+E       ++ +S  LAWGKNG RS+ R  
Sbjct: 264 KWAGA-----RSAAVNADGGGDENDSEVNKESVGGSSGLVGSSERLAWGKNGMRSHTRYG 318

Query: 279 -----NGKNARNSRISRLVDHLRNSASNDYGLSVFLMLVSLDEQSIPSLQLPYLTCNRTV 115
                N KNAR+SRIS+L D+LRN   ND  L + LMLVS DEQ +PSLQ PYL C  T+
Sbjct: 319 SANGSNVKNARSSRISKLADYLRNLEGNDNELDINLMLVSFDEQRVPSLQRPYLCCRPTL 378

Query: 114 SVKILCKYVAFKTDLREGEVELSLVLKPQANI 19
           S+  LC+YVAF+T L+  EVE+ LV +  + +
Sbjct: 379 SINKLCQYVAFQTSLQANEVEIYLVREMNSKV 410


>ref|XP_002273941.2| PREDICTED: putative E3 ubiquitin-protein ligase RING1a-like [Vitis
            vinifera]
          Length = 534

 Score =  227 bits (579), Expect = 2e-57
 Identities = 143/270 (52%), Positives = 164/270 (60%), Gaps = 16/270 (5%)
 Frame = -3

Query: 789  NFDALIAALYPDIDKYEEQELALQEDEKTHNKQIQASIAQTLHRQTEASSKKRN-AKATA 613
            N+DALIAALYPDIDKYE++ELA  E+EKT NKQIQASIAQTL RQ+EA  +KR  AKATA
Sbjct: 218  NYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRTTAKATA 277

Query: 612  MAFLRRSQGNYRTSHLRRRRNIRNTGQVSXXXXXXXXXXXXXXXXXXDEQ--METKPSGC 439
             AF RRSQGNYR    R RRN R T  +                    E    E KP   
Sbjct: 278  AAFARRSQGNYR----RGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPKRS 333

Query: 438  KRGEQETQFPQHSAITDPDGTGDENIQEVNREIMSASG-------TLAWGKNGQRSNNRV 280
            +R          S   + DG GDEN  E NRE M AS         LAWGK G RS+ R 
Sbjct: 334  RRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILAWGKGGMRSHTRY 393

Query: 279  ------NGKNARNSRISRLVDHLRNSASNDYGLSVFLMLVSLDEQSIPSLQLPYLTCNRT 118
                  NGKNAR+SR+S+LVD+LRN   ND  L + LMLVSLDEQ IPSLQ PYL C  T
Sbjct: 394  GSVSGGNGKNARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIPSLQTPYLCCRPT 453

Query: 117  VSVKILCKYVAFKTDLREGEVELSLVLKPQ 28
            +SV+ LC+YVA +T L   EVE+ LV+K Q
Sbjct: 454  LSVRHLCQYVALQTPLLADEVEI-LVIKEQ 482


>emb|CBI30594.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  227 bits (579), Expect = 2e-57
 Identities = 143/270 (52%), Positives = 164/270 (60%), Gaps = 16/270 (5%)
 Frame = -3

Query: 789 NFDALIAALYPDIDKYEEQELALQEDEKTHNKQIQASIAQTLHRQTEASSKKRN-AKATA 613
           N+DALIAALYPDIDKYE++ELA  E+EKT NKQIQASIAQTL RQ+EA  +KR  AKATA
Sbjct: 117 NYDALIAALYPDIDKYEQEELAFHEEEKTRNKQIQASIAQTLRRQSEALGRKRTTAKATA 176

Query: 612 MAFLRRSQGNYRTSHLRRRRNIRNTGQVSXXXXXXXXXXXXXXXXXXDEQ--METKPSGC 439
            AF RRSQGNYR    R RRN R T  +                    E    E KP   
Sbjct: 177 AAFARRSQGNYR----RGRRNYRATDLLGSEDDEDANGNDGGKDSSSAEDHSAEVKPKRS 232

Query: 438 KRGEQETQFPQHSAITDPDGTGDENIQEVNREIMSASG-------TLAWGKNGQRSNNRV 280
           +R          S   + DG GDEN  E NRE M AS         LAWGK G RS+ R 
Sbjct: 233 RRWGGVRFSQPSSGAANADGGGDENDLEPNREAMGASAGLVGNSEILAWGKGGMRSHTRY 292

Query: 279 ------NGKNARNSRISRLVDHLRNSASNDYGLSVFLMLVSLDEQSIPSLQLPYLTCNRT 118
                 NGKNAR+SR+S+LVD+LRN   ND  L + LMLVSLDEQ IPSLQ PYL C  T
Sbjct: 293 GSVSGGNGKNARSSRLSKLVDYLRNLDQNDDELDIHLMLVSLDEQRIPSLQTPYLCCRPT 352

Query: 117 VSVKILCKYVAFKTDLREGEVELSLVLKPQ 28
           +SV+ LC+YVA +T L   EVE+ LV+K Q
Sbjct: 353 LSVRHLCQYVALQTPLLADEVEI-LVIKEQ 381


>ref|XP_002329795.1| predicted protein [Populus trichocarpa] gi|222870857|gb|EEF07988.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  223 bits (567), Expect = 5e-56
 Identities = 135/265 (50%), Positives = 163/265 (61%), Gaps = 15/265 (5%)
 Frame = -3

Query: 789 NFDALIAALYPDIDKYEEQELALQEDEKTHNKQIQASIAQTLHRQTEASSKKRN-AKATA 613
           N+DALIAALYPDIDKYEE+ELA QEDEK  NK+IQA+IAQT  RQ EA S+KR+ AKATA
Sbjct: 133 NYDALIAALYPDIDKYEEEELAFQEDEKARNKEIQATIAQTFDRQAEALSRKRSTAKATA 192

Query: 612 MAFLRRSQGNYRTSHLRRRRNIRNTG-QVSXXXXXXXXXXXXXXXXXXDEQMETKPSGCK 436
             F RR+   +R +H R RRN R    Q S                  +   E KP   +
Sbjct: 193 AVFARRTPSRFRDAHSRGRRNYRIAELQGSDDNEDANGGGGKDSSSTDEHSAEVKPKRYR 252

Query: 435 RGEQETQFPQHSAITDPDGTGDENIQEVNRE-------IMSASGTLAWGKNGQRSNNRV- 280
           R          SA  + DG+G EN  EVN+E       ++S+S  LAWGKNG RS+ R  
Sbjct: 253 RC---------SAAFNADGSGGENDSEVNKESVGASAGLISSSERLAWGKNGMRSHTRYG 303

Query: 279 -----NGKNARNSRISRLVDHLRNSASNDYGLSVFLMLVSLDEQSIPSLQLPYLTCNRTV 115
                N KNARNSRIS+L D+LRN   ND  L + LMLVS DEQ +PSLQ PYL C  T+
Sbjct: 304 SANGSNVKNARNSRISKLADYLRNLDENDNELDINLMLVSFDEQRVPSLQRPYLCCRPTL 363

Query: 114 SVKILCKYVAFKTDLREGEVELSLV 40
           S+K LC+YVAF+T L+  EVE+ LV
Sbjct: 364 SIKSLCQYVAFQTSLQANEVEIYLV 388


>ref|XP_002509447.1| ring finger protein, putative [Ricinus communis]
           gi|223549346|gb|EEF50834.1| ring finger protein,
           putative [Ricinus communis]
          Length = 418

 Score =  214 bits (544), Expect = 2e-53
 Identities = 132/265 (49%), Positives = 155/265 (58%), Gaps = 15/265 (5%)
 Frame = -3

Query: 789 NFDALIAALYPDIDKYEEQELALQEDEKTHNKQIQASIAQTLHRQTEASSKKRN-AKATA 613
           N+DALIAALYPDIDKYEE+ELA  E+EK  NKQIQASI QT+ RQ EA  +KR  AKAT 
Sbjct: 94  NYDALIAALYPDIDKYEEEELAFHEEEKARNKQIQASITQTIRRQAEALGRKRTTAKATV 153

Query: 612 MAFLRRSQGNYRTSHLRRRRNIRNTG-QVSXXXXXXXXXXXXXXXXXXDEQMETKPSGCK 436
             F RR+QG YR +H R RRN R    Q S                  +   E KP   K
Sbjct: 154 APFARRTQGRYRDAHSRGRRNYRTADLQGSDEIEDVNGDGGKDSSSAEEHSAEVKPKRIK 213

Query: 435 RGEQETQFPQHSAITDPDGTGDENIQEVNREIMSASG-------TLAWGKNGQRSNNRV- 280
           R          S   + DG GDEN  EVNRE M +S         LAWG+ G RS+ R  
Sbjct: 214 RWGGA-----RSGAANADGGGDENDSEVNRESMGSSAGLVGPSERLAWGRGGIRSHTRYG 268

Query: 279 -----NGKNARNSRISRLVDHLRNSASNDYGLSVFLMLVSLDEQSIPSLQLPYLTCNRTV 115
                NGKNARNSRI +L D+LRN   N+  L + LMLVS DE+ IPSLQ PYL C  T+
Sbjct: 269 SANAGNGKNARNSRIFKLADYLRNLEENNNELDICLMLVSFDEEKIPSLQRPYLCCRPTL 328

Query: 114 SVKILCKYVAFKTDLREGEVELSLV 40
           SVK L +YVA +T L+  E+E+ LV
Sbjct: 329 SVKHLRQYVALQTALQTEEIEIYLV 353


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