BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026037
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi...   303   1e-80
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi...   257   6e-67
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi...   246   1e-63
ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|2...   242   3e-62
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ...   240   8e-62

>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Glycine max]
          Length = 609

 Score =  303 bits (775), Expect = 1e-80
 Identities = 150/171 (87%), Positives = 160/171 (93%)
 Frame = +3

Query: 3   ARGYARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLG 182
           ARGYARFDDPLRAILL S VLCS GLLPDDYTFSSLLKAC+R+KAL EGKQLHCL+VKLG
Sbjct: 107 ARGYARFDDPLRAILLCSQVLCS-GLLPDDYTFSSLLKACARLKALEEGKQLHCLAVKLG 165

Query: 183 VSDNMYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFR 362
           V DNMYVCPTLINMYT+C D+DAARRVFDKI EPCVVAYNAII S  R+S+PNEALALFR
Sbjct: 166 VGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFR 225

Query: 363 ELQKSGLKPTDVTMLVVLSSCALLGALDLGRWMHEYVKKNGFDQHVKVNTA 515
           ELQ+SGLKPTDVTMLV LSSCALLGALDLGRW+HEYVKKNGFDQ+VKVNTA
Sbjct: 226 ELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTA 276



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
 Frame = +3

Query: 15  ARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLGVSDN 194
           AR   P  A+ LF  +  S GL P D T    L +C+ + AL  G+ +H    K G    
Sbjct: 212 ARNSRPNEALALFRELQES-GLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQY 270

Query: 195 MYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFRELQK 374
           + V   LI+MY  CG +D A  VF  +      A++A+I +       ++A+++ RE++K
Sbjct: 271 VKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKK 330

Query: 375 SGLKPTDVTMLVVLSSCALLGALDLG-RWMHEYVKKNGFDQHVK 503
           + ++P ++T L +L +C+  G ++ G  + H    + G    +K
Sbjct: 331 AKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIK 374



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
 Frame = +3

Query: 102 SSLLKACSRVKALWEGKQLHCLSVKLGVSDNMYVCPTLINMYTS---CGDIDAARRVFDK 272
           SS+L    +  +L E KQ+   ++K    +N  V   LIN  TS      +D A R+FDK
Sbjct: 36  SSILSLIPKCTSLRELKQIQAYTIKTH-QNNPTVLTKLINFCTSNPTIASMDHAHRMFDK 94

Query: 273 IDEPCVVAYNAIIASLVRSSQPNEALALFRELQKSGLKPTDVTMLVVLSSCALLGALDLG 452
           I +P +V +N +     R   P  A+ L  ++  SGL P D T   +L +CA L AL+ G
Sbjct: 95  IPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEG 154

Query: 453 RWMHEYVKKNGFDQHVKV 506
           + +H    K G   ++ V
Sbjct: 155 KQLHCLAVKLGVGDNMYV 172


>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
           protein product [Vitis vinifera]
          Length = 595

 Score =  257 bits (657), Expect = 6e-67
 Identities = 126/171 (73%), Positives = 145/171 (84%)
 Frame = +3

Query: 3   ARGYARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLG 182
           ARGYAR D PLRA  LF+ +L S GL PDDYTF SLLKAC+  KAL EG+QLHCL++KLG
Sbjct: 93  ARGYARTDTPLRAFTLFTQILFS-GLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLG 151

Query: 183 VSDNMYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFR 362
           +S+N+YVCPTLINMYT+C ++D ARRVFDKI EPCVV YNA+I    R S+PNEAL+LFR
Sbjct: 152 LSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFR 211

Query: 363 ELQKSGLKPTDVTMLVVLSSCALLGALDLGRWMHEYVKKNGFDQHVKVNTA 515
           ELQ   LKPTDVTML VLSSCALLGALDLG+WMHEYVKKNGF++ VKV+TA
Sbjct: 212 ELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTA 262



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 50/148 (33%), Positives = 82/148 (55%)
 Frame = +3

Query: 9   GYARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLGVS 188
           GYAR   P  A+ LF   L +  L P D T  S+L +C+ + AL  GK +H    K G +
Sbjct: 196 GYARGSRPNEALSLFRE-LQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFN 254

Query: 189 DNMYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFREL 368
             + V   LI+MY  CG +D A  VF+ +      A++A+I +        +A++LF+E+
Sbjct: 255 RFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEM 314

Query: 369 QKSGLKPTDVTMLVVLSSCALLGALDLG 452
           +K+G +P ++T L +L +C+  G ++ G
Sbjct: 315 RKAGTEPDEITFLGLLYACSHTGLVEEG 342



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 3/137 (2%)
 Frame = +3

Query: 105 SLLKACSRVKALWEGKQLHCLSVKLGVSDNMYVCPTLINMYT---SCGDIDAARRVFDKI 275
           SLL  C+ ++ L   KQL   ++K  +  ++ V    IN  +   +   +  A  +FD+I
Sbjct: 25  SLLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQI 81

Query: 276 DEPCVVAYNAIIASLVRSSQPNEALALFRELQKSGLKPTDVTMLVVLSSCALLGALDLGR 455
            +P +V +N +     R+  P  A  LF ++  SGL P D T   +L +CA   AL+ GR
Sbjct: 82  PQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR 141

Query: 456 WMHEYVKKNGFDQHVKV 506
            +H    K G  ++V V
Sbjct: 142 QLHCLAIKLGLSENVYV 158


>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
           gi|449478665|ref|XP_004155385.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  246 bits (628), Expect = 1e-63
 Identities = 118/171 (69%), Positives = 142/171 (83%)
 Frame = +3

Query: 3   ARGYARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLG 182
           ARGYAR + P  A  LF  +LCS GLLPDDYTFSSLLKAC+  KAL EG  LHC +VKLG
Sbjct: 102 ARGYARSNSPYLAFSLFGELLCS-GLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLG 160

Query: 183 VSDNMYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFR 362
           ++ N+Y+CPTLINMY  C D++AAR VFD++++PC+V+YNAII    RSSQPNEAL+LFR
Sbjct: 161 LNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFR 220

Query: 363 ELQKSGLKPTDVTMLVVLSSCALLGALDLGRWMHEYVKKNGFDQHVKVNTA 515
           ELQ S ++PTDVTML V+ SCALLGALDLG+W+HEYVKK GFD++VKVNTA
Sbjct: 221 ELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTA 271



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 3/137 (2%)
 Frame = +3

Query: 105 SLLKACSRVKALWEGKQLHCLSVKLGVSDNMYVCPTLINMYT---SCGDIDAARRVFDKI 275
           SLL  C+ +  L   KQ+   ++K  +  ++ V   LIN  T   +   +D A  +FD+I
Sbjct: 34  SLLSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQI 90

Query: 276 DEPCVVAYNAIIASLVRSSQPNEALALFRELQKSGLKPTDVTMLVVLSSCALLGALDLGR 455
            +  ++ +N +     RS+ P  A +LF EL  SGL P D T   +L +CA   AL  G 
Sbjct: 91  LDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGM 150

Query: 456 WMHEYVKKNGFDQHVKV 506
            +H +  K G + ++ +
Sbjct: 151 GLHCFAVKLGLNHNIYI 167


>ref|XP_002316137.1| predicted protein [Populus trichocarpa] gi|222865177|gb|EEF02308.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score =  242 bits (617), Expect = 3e-62
 Identities = 118/170 (69%), Positives = 140/170 (82%)
 Frame = +3

Query: 6   RGYARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLGV 185
           RGY+R + PL+AI LF   L +Y LLPDDYTF SLLKAC   KA  +GKQLHCL++KLG+
Sbjct: 100 RGYSRSNAPLKAISLFIKAL-NYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGL 158

Query: 186 SDNMYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFRE 365
           ++N YVCPTLINMY  C D+D A+RVFD+I EPCVV+YNAII    RSS+PNEAL+LFR+
Sbjct: 159 NENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQ 218

Query: 366 LQKSGLKPTDVTMLVVLSSCALLGALDLGRWMHEYVKKNGFDQHVKVNTA 515
           LQ   LKP DVT+L VLSSCALLGALDLG+W+HEYVKKNG D++VKVNTA
Sbjct: 219 LQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTA 268



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 48/148 (32%), Positives = 81/148 (54%)
 Frame = +3

Query: 9   GYARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLGVS 188
           GYAR   P  A+ LF   L +  L P+D T  S+L +C+ + AL  GK +H    K G+ 
Sbjct: 202 GYARSSRPNEALSLFRQ-LQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLD 260

Query: 189 DNMYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFREL 368
             + V   LI+MY  CG +D A  VF+ +      A++A+I +     Q  + +++F E+
Sbjct: 261 KYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHGQGQDVMSMFEEM 320

Query: 369 QKSGLKPTDVTMLVVLSSCALLGALDLG 452
            ++ ++P ++T L +L +C+  G +D G
Sbjct: 321 ARAKVQPDEITFLGLLYACSHTGLVDEG 348



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
 Frame = +3

Query: 102 SSLLKACSRVKALWEGKQLHCLSVKLGVSDNMYVCPTLINMYT---SCGDIDAARRVFDK 272
           SSLL    +  +L E KQ+   S+K  + +++ +   LIN  T   +   +D A ++F+ 
Sbjct: 27  SSLLSCLPKCTSLKELKQIQAFSIKTHLQNDLQILTKLINSCTQNPTTASMDYAHQLFEA 86

Query: 273 IDEPCVVAYNAIIASLVRSSQPNEALALFRELQKSGLKPTDVTMLVVLSSCALLGALDLG 452
           I +P +V +N++     RS+ P +A++LF +     L P D T   +L +C +  A   G
Sbjct: 87  IPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQG 146

Query: 453 RWMHEYVKKNGFDQH 497
           + +H    K G +++
Sbjct: 147 KQLHCLAIKLGLNEN 161


>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515122|gb|AES96745.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 586

 Score =  240 bits (613), Expect = 8e-62
 Identities = 125/170 (73%), Positives = 139/170 (81%)
 Frame = +3

Query: 3   ARGYARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLG 182
           ARGYAR +DPLR I   +H             F   L+  S+VKAL EGKQLHC +VKLG
Sbjct: 99  ARGYARLNDPLRMI---TH-------------FRRCLRLVSKVKALAEGKQLHCFAVKLG 142

Query: 183 VSDNMYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFR 362
           VSDNMYV PTLINMYT+CGDIDA+RRVFDKIDEPCVVAYNAII SL R+++ NEALALFR
Sbjct: 143 VSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFR 202

Query: 363 ELQKSGLKPTDVTMLVVLSSCALLGALDLGRWMHEYVKKNGFDQHVKVNT 512
           ELQ+ GLKPTDVTMLVVLSSCALLG+LDLGRWMHEYVKK GFD++VKVNT
Sbjct: 203 ELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNT 252



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
 Frame = +3

Query: 15  ARFDDPLRAILLFSHVLCSYGLLPDDYTFSSLLKACSRVKALWEGKQLHCLSVKLGVSDN 194
           AR +    A+ LF   L   GL P D T   +L +C+ + +L  G+ +H    K G    
Sbjct: 189 ARNNRANEALALFRE-LQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRY 247

Query: 195 MYVCPTLINMYTSCGDIDAARRVFDKIDEPCVVAYNAIIASLVRSSQPNEALALFRELQK 374
           + V  TLI+MY  CG +D A  VF  + +    A++AII +        +A+++  E++K
Sbjct: 248 VKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKK 307

Query: 375 SGLKPTDVTMLVVLSSCALLGALDLG-RWMHEYVKKNGFDQHVK 503
             ++P ++T L +L +C+  G ++ G  + H    + G    +K
Sbjct: 308 EKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIK 351