BLASTX nr result

ID: Glycyrrhiza24_contig00026036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026036
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636525.1| Cc-nbs-lrr resistance protein [Medicago trun...   114   6e-24
ref|XP_003636521.1| Resistance protein RGC2, partial [Medicago t...   112   4e-23
ref|XP_003590094.1| Rpp4 candidate [Medicago truncatula] gi|3554...   111   5e-23
ref|XP_003636218.1| Rpp4 candidate [Medicago truncatula] gi|3555...   110   2e-22
ref|XP_003590096.1| Cc-nbs-lrr resistance protein [Medicago trun...   107   8e-22

>ref|XP_003636525.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355502460|gb|AES83663.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 2248

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/81 (69%), Positives = 61/81 (75%)
 Frame = -1

Query: 244  VAFVSFKHLKLSEYHELKELWYGQPQHNIFRSLKSLVVHKCDFLSDVLFQPNXXXXXXXX 65
            V FVSFKHL+LSEY ELKELWYGQ +HN FRSLK LVVHKCDFLSDVLFQPN        
Sbjct: 1528 VGFVSFKHLQLSEYPELKELWYGQHEHNTFRSLKYLVVHKCDFLSDVLFQPNLLEVLMNL 1587

Query: 64   XXXEIRDCVSLEVVFDLKGKF 2
               ++ DC SLE VFDLK +F
Sbjct: 1588 EELDVEDCNSLEAVFDLKDEF 1608


>ref|XP_003636521.1| Resistance protein RGC2, partial [Medicago truncatula]
           gi|355502456|gb|AES83659.1| Resistance protein RGC2,
           partial [Medicago truncatula]
          Length = 906

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/81 (66%), Positives = 62/81 (76%)
 Frame = -1

Query: 244 VAFVSFKHLKLSEYHELKELWYGQPQHNIFRSLKSLVVHKCDFLSDVLFQPNXXXXXXXX 65
           V F SFKHLKL+EY ELKELWYGQ +HN FRSLK LVVHKCDFLS+VLFQPN        
Sbjct: 21  VGFGSFKHLKLTEYPELKELWYGQLEHNAFRSLKHLVVHKCDFLSNVLFQPNLVGVLMNL 80

Query: 64  XXXEIRDCVSLEVVFDLKGKF 2
              ++++C SLE VFDLKG+F
Sbjct: 81  EKLDVKNCNSLEAVFDLKGEF 101



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/79 (46%), Positives = 47/79 (59%)
 Frame = -1

Query: 244 VAFVSFKHLKLSEYHELKELWYGQPQHNIFRSLKSLVVHKCDFLSDVLFQPNXXXXXXXX 65
           VAF  FK+L LS+Y E+K+LWYGQ  HN+F +LK LVV +       L Q          
Sbjct: 464 VAFGEFKYLALSDYPEIKDLWYGQLHHNMFCNLKHLVVER-------LLQ--------TL 508

Query: 64  XXXEIRDCVSLEVVFDLKG 8
              E++DC SLE VFD+KG
Sbjct: 509 EELEVKDCDSLEAVFDVKG 527


>ref|XP_003590094.1| Rpp4 candidate [Medicago truncatula] gi|355479142|gb|AES60345.1|
           Rpp4 candidate [Medicago truncatula]
          Length = 1039

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/81 (66%), Positives = 63/81 (77%)
 Frame = -1

Query: 244 VAFVSFKHLKLSEYHELKELWYGQPQHNIFRSLKSLVVHKCDFLSDVLFQPNXXXXXXXX 65
           VAF SFKHLKLSEY ELKELWYG+ +HN+FRSLK LVVHKC+FLS+VLF+PN        
Sbjct: 17  VAFGSFKHLKLSEYPELKELWYGKLEHNVFRSLKCLVVHKCEFLSEVLFRPNLLEVLTNL 76

Query: 64  XXXEIRDCVSLEVVFDLKGKF 2
              +I+DC SLE VFDLK +F
Sbjct: 77  EELDIKDCNSLEAVFDLKDEF 97



 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 40/78 (51%), Positives = 54/78 (69%)
 Frame = -1

Query: 244 VAFVSFKHLKLSEYHELKELWYGQPQHNIFRSLKSLVVHKCDFLSDVLFQPNXXXXXXXX 65
           VAF  FK+L LS++ EL+++WYG+  HN+F +LK LVV +CDFLS VLF  N        
Sbjct: 519 VAFREFKYLALSDHSELEDIWYGRLDHNVFCNLKHLVVERCDFLSQVLFPSNVVQVLHGL 578

Query: 64  XXXEIRDCVSLEVVFDLK 11
              E+R+C SLEVVFD++
Sbjct: 579 EELEVRNCDSLEVVFDVR 596


>ref|XP_003636218.1| Rpp4 candidate [Medicago truncatula] gi|355502153|gb|AES83356.1|
           Rpp4 candidate [Medicago truncatula]
          Length = 1053

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/81 (65%), Positives = 58/81 (71%)
 Frame = -1

Query: 244 VAFVSFKHLKLSEYHELKELWYGQPQHNIFRSLKSLVVHKCDFLSDVLFQPNXXXXXXXX 65
           V F  FKHLKLSEY ELKE WYGQ +HN FRSLK LVVHKCDFLSDVLFQPN        
Sbjct: 7   VGFGGFKHLKLSEYPELKEFWYGQLEHNAFRSLKHLVVHKCDFLSDVLFQPNLLEVLMNL 66

Query: 64  XXXEIRDCVSLEVVFDLKGKF 2
              ++ DC SLE +FDLK +F
Sbjct: 67  EELDVEDCNSLEAIFDLKDEF 87



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/79 (54%), Positives = 53/79 (67%)
 Frame = -1

Query: 244 VAFVSFKHLKLSEYHELKELWYGQPQHNIFRSLKSLVVHKCDFLSDVLFQPNXXXXXXXX 65
           VAF  FK+L LS+Y ELK++WYGQ   N+F +LK LVV +CDFLS VLF  N        
Sbjct: 527 VAFGKFKYLALSDYPELKDVWYGQLHCNVFCNLKHLVVERCDFLSHVLFPSNVMQVLQTL 586

Query: 64  XXXEIRDCVSLEVVFDLKG 8
              E++DC SLE VFD+KG
Sbjct: 587 EELEVKDCDSLEAVFDVKG 605


>ref|XP_003590096.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355479144|gb|AES60347.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 545

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = -1

Query: 244 VAFVSFKHLKLSEYHELKELWYGQPQHNIFRSLKSLVVHKCDFLSDVLFQPNXXXXXXXX 65
           VAF  FKHLKLSEY ELKE WYG+ +HN+FRSLK LVVH CDFLS+VLFQPN        
Sbjct: 6   VAFGYFKHLKLSEYPELKESWYGKLEHNVFRSLKYLVVHNCDFLSEVLFQPNLLEVLTNL 65

Query: 64  XXXEIRDCVSLEVVFDLKGKF 2
              +I+DC SLE VFDLK +F
Sbjct: 66  EELDIKDCNSLEAVFDLKDEF 86


Top