BLASTX nr result

ID: Glycyrrhiza24_contig00026033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026033
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   295   2e-78
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              295   4e-78
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   295   4e-78
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   292   2e-77
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   291   5e-77

>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
            DNA-directed RNA polymerase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 997

 Score =  295 bits (756), Expect = 2e-78
 Identities = 139/156 (89%), Positives = 149/156 (95%)
 Frame = -1

Query: 523  KVIASTNQPVRWTTPLGLPVVQPYRQLGRNIIKTSLQILSLQRETSKVLVKRQRTAFPPN 344
            KVIAS NQPV+WTTPLGLPVVQPYRQLGR++IKTSLQ+L+LQ+ET K++VKRQRTAFPPN
Sbjct: 842  KVIASENQPVQWTTPLGLPVVQPYRQLGRHLIKTSLQMLALQKETDKIMVKRQRTAFPPN 901

Query: 343  FVHSLDGSHMMMTAVTCKNAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 164
            FVHSLDGSHMMMTAV CK+AGLNFAGVHDSYWTHACDVDEMNRILRE FVELYEAPILEN
Sbjct: 902  FVHSLDGSHMMMTAVACKHAGLNFAGVHDSYWTHACDVDEMNRILRENFVELYEAPILEN 961

Query: 163  LLESFQKSFPTLNFPPLPDRGDFDLREVLESPYFFN 56
            LLE FQKSFP L FPPLPDRGDFDLR+VLESPYFFN
Sbjct: 962  LLEGFQKSFPKLKFPPLPDRGDFDLRDVLESPYFFN 997


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  295 bits (754), Expect = 4e-78
 Identities = 140/156 (89%), Positives = 147/156 (94%)
 Frame = -1

Query: 523  KVIASTNQPVRWTTPLGLPVVQPYRQLGRNIIKTSLQILSLQRETSKVLVKRQRTAFPPN 344
            KVIAS N PVRW TPLGLPVVQPYR+LGR++IKTSLQ+LSLQRET KV+VKRQRTAFPPN
Sbjct: 655  KVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPN 714

Query: 343  FVHSLDGSHMMMTAVTCKNAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 164
            FVHSLDGSHMMMTAV C+ AGLNFAGVHDSYWTHACDVDEMNRILREKFVELY  PILEN
Sbjct: 715  FVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILEN 774

Query: 163  LLESFQKSFPTLNFPPLPDRGDFDLREVLESPYFFN 56
            LLE FQKSFPTLNFPPLP+RGDFDLREVLESPYFFN
Sbjct: 775  LLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  295 bits (754), Expect = 4e-78
 Identities = 140/156 (89%), Positives = 147/156 (94%)
 Frame = -1

Query: 523  KVIASTNQPVRWTTPLGLPVVQPYRQLGRNIIKTSLQILSLQRETSKVLVKRQRTAFPPN 344
            KVIAS N PVRW TPLGLPVVQPYR+LGR++IKTSLQ+LSLQRET KV+VKRQRTAFPPN
Sbjct: 823  KVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPN 882

Query: 343  FVHSLDGSHMMMTAVTCKNAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 164
            FVHSLDGSHMMMTAV C+ AGLNFAGVHDSYWTHACDVDEMNRILREKFVELY  PILEN
Sbjct: 883  FVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILEN 942

Query: 163  LLESFQKSFPTLNFPPLPDRGDFDLREVLESPYFFN 56
            LLE FQKSFPTLNFPPLP+RGDFDLREVLESPYFFN
Sbjct: 943  LLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  292 bits (748), Expect = 2e-77
 Identities = 135/156 (86%), Positives = 148/156 (94%)
 Frame = -1

Query: 523  KVIASTNQPVRWTTPLGLPVVQPYRQLGRNIIKTSLQILSLQRETSKVLVKRQRTAFPPN 344
            K+IAS NQPVRWTTPLGLPVVQPYR+LGR++IKTSLQ+L+LQRET  ++VKRQRTAFPPN
Sbjct: 880  KIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPN 939

Query: 343  FVHSLDGSHMMMTAVTCKNAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 164
            FVHSLDGSHMMMTA+ CK AGLNFAGVHDSYWTHACDVDEMNR+LREKFV+LYE PILEN
Sbjct: 940  FVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILEN 999

Query: 163  LLESFQKSFPTLNFPPLPDRGDFDLREVLESPYFFN 56
            LLESFQ+SFP L FPPLP+RGDFDLREVLESPYFFN
Sbjct: 1000 LLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Glycine max]
          Length = 949

 Score =  291 bits (744), Expect = 5e-77
 Identities = 138/156 (88%), Positives = 148/156 (94%)
 Frame = -1

Query: 523  KVIASTNQPVRWTTPLGLPVVQPYRQLGRNIIKTSLQILSLQRETSKVLVKRQRTAFPPN 344
            KVIASTNQ V+W TPLGLPVVQPYRQ GR++IKTSLQIL+LQRET+KV+VKRQRTAFPPN
Sbjct: 794  KVIASTNQAVQWITPLGLPVVQPYRQFGRHLIKTSLQILTLQRETNKVMVKRQRTAFPPN 853

Query: 343  FVHSLDGSHMMMTAVTCKNAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILEN 164
            FVHSLDGSHMMMT V CK AGLNFAGVHDSYWTHACDVDEMNRILREKFVELY+APILEN
Sbjct: 854  FVHSLDGSHMMMTTVACKKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYDAPILEN 913

Query: 163  LLESFQKSFPTLNFPPLPDRGDFDLREVLESPYFFN 56
            LLESFQK+FP LNFPPLP+RGDFDL+EVLES YFFN
Sbjct: 914  LLESFQKTFPALNFPPLPERGDFDLQEVLESTYFFN 949


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