BLASTX nr result

ID: Glycyrrhiza24_contig00026026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026026
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Gly...   104   9e-21
ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Gly...   100   2e-19
ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Gly...    97   2e-18
ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vit...    91   1e-16

>ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 362

 Score =  104 bits (259), Expect = 9e-21
 Identities = 49/94 (52%), Positives = 63/94 (67%)
 Frame = -1

Query: 316 ESMASSSMISTMHPEIIQTHIXXXXXXXXXXXXASVSSHLRRLCTDDSIWRDICTATWPS 137
           +  +SSS I+T+HP+I Q+HI            AS +SHLR LCT+  +WR+IC ATWPS
Sbjct: 37  DKTSSSSDITTVHPDIFQSHILNRLDGPTLASAASATSHLRGLCTEHHLWRNICAATWPS 96

Query: 136 LADPIAGDAISTFPGGHFSIFSDAFPALHHLSEN 35
           L DP+A   I+TFP  H SIFSD+FP+LHH   N
Sbjct: 97  LNDPLAAATIATFPATHRSIFSDSFPSLHHSPPN 130


>ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 326

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/94 (51%), Positives = 63/94 (67%)
 Frame = -1

Query: 316 ESMASSSMISTMHPEIIQTHIXXXXXXXXXXXXASVSSHLRRLCTDDSIWRDICTATWPS 137
           ++ + SS I+T+HP+I Q+HI            AS +SHLRRLCT+  +WR+I  ATWPS
Sbjct: 2   DNTSFSSDITTVHPDIFQSHILNRLDGPTLASAASSTSHLRRLCTEHHLWRNISAATWPS 61

Query: 136 LADPIAGDAISTFPGGHFSIFSDAFPALHHLSEN 35
           L DP+A   I+TFP  H SIFSD+FP+LHH   N
Sbjct: 62  LNDPLAAAIITTFPARHRSIFSDSFPSLHHSPPN 95


>ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 341

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/92 (52%), Positives = 60/92 (65%)
 Frame = -1

Query: 316 ESMASSSMISTMHPEIIQTHIXXXXXXXXXXXXASVSSHLRRLCTDDSIWRDICTATWPS 137
           E   S+S ++T+H +II  HI            ASVSS + RLCT D +WR+I TATWPS
Sbjct: 15  EKTESTSSLATLHSDIIHAHILTRLDGATLASAASVSSLMHRLCTQDDLWREISTATWPS 74

Query: 136 LADPIAGDAISTFPGGHFSIFSDAFPALHHLS 41
           L +PIA   IS  PGG+ SIFSDAFP+LH+ S
Sbjct: 75  LQNPIARHVISAIPGGYRSIFSDAFPSLHNSS 106


>ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|222850012|gb|EEE87559.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/87 (49%), Positives = 54/87 (62%)
 Frame = -1

Query: 292 ISTMHPEIIQTHIXXXXXXXXXXXXASVSSHLRRLCTDDSIWRDICTATWPSLADPIAGD 113
           IST+HP+I+QTHI            A  SS L  L T+D +W+ ICT+TWPS+ DPI   
Sbjct: 24  ISTLHPDILQTHILTLLDGPTLAATACASSELHALSTEDKLWQKICTSTWPSINDPIVRS 83

Query: 112 AISTFPGGHFSIFSDAFPALHHLSENS 32
            I TFP GH S FSD++P LHH   +S
Sbjct: 84  IIPTFPSGHLSFFSDSYPLLHHNHHSS 110


>ref|XP_002273038.1| PREDICTED: F-box protein At2g27310-like [Vitis vinifera]
          Length = 336

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/85 (49%), Positives = 53/85 (62%)
 Frame = -1

Query: 301 SSMISTMHPEIIQTHIXXXXXXXXXXXXASVSSHLRRLCTDDSIWRDICTATWPSLADPI 122
           S+ I+++HP+IIQTHI             + SS L  L T D +WRDICT+TWPSL DP 
Sbjct: 5   STTITSVHPDIIQTHILTRLDGPTLAAAGAASSQLHALATVDKLWRDICTSTWPSLNDPT 64

Query: 121 AGDAISTFPGGHFSIFSDAFPALHH 47
               +S FPGGH S FSD++P L H
Sbjct: 65  LQALVSAFPGGHRSFFSDSYPLLAH 89


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