BLASTX nr result

ID: Glycyrrhiza24_contig00026020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00026020
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613092.1| Zinc finger-homeodomain protein [Medicago tr...   193   1e-47
ref|XP_003519839.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   182   3e-44
ref|XP_003517708.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   181   7e-44
gb|AFK36118.1| unknown [Medicago truncatula]                          178   4e-43
ref|XP_004143449.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   164   9e-39

>ref|XP_003613092.1| Zinc finger-homeodomain protein [Medicago truncatula]
           gi|355514427|gb|AES96050.1| Zinc finger-homeodomain
           protein [Medicago truncatula]
          Length = 358

 Score =  193 bits (490), Expect = 1e-47
 Identities = 106/157 (67%), Positives = 117/157 (74%), Gaps = 7/157 (4%)
 Frame = -2

Query: 452 SNSSSN------SGKVRYRECLKNHAVTIGGHALDGCGEFMAAGTEGTLDALKCAACNCH 291
           +N +SN      +GK RYRECLKNHAV IGGHALDGCGEFM AG+EGTL++LKCAACNCH
Sbjct: 61  NNGNSNIGGVVGNGKARYRECLKNHAVGIGGHALDGCGEFMPAGSEGTLESLKCAACNCH 120

Query: 290 RNFHRKETPI-AGSGDPYLLTXXXXXXXXXXPQFAAYYRTPAGYLHVAGQQRAGTLALPX 114
           RNFHRKE+     +GDP+LLT          PQFAAYYRTPAGYLHV+GQQR GTLALP 
Sbjct: 121 RNFHRKESSADVTAGDPFLLT-HHHHHPPPPPQFAAYYRTPAGYLHVSGQQRTGTLALP- 178

Query: 113 XXXXXXXXTQSTREDQEEDVSNPSAGGGGSSKKRFRT 3
                   TQSTRE+  EDVSNPS GG GSSKKR RT
Sbjct: 179 STSGGGGGTQSTREEL-EDVSNPSGGGSGSSKKRHRT 214


>ref|XP_003519839.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 245

 Score =  182 bits (461), Expect = 3e-44
 Identities = 102/158 (64%), Positives = 111/158 (70%), Gaps = 9/158 (5%)
 Frame = -2

Query: 449 NSSSNSGKVRYRECLKNHAVTIGGHALDGCGEFMAAGTEGTLDALKCAACNCHRNFHRKE 270
           +++   G+ RYRECLKNHAV IGGHALDGCGEFMAAG EGTLDALKCAAC+CHRNFHRKE
Sbjct: 38  STNGGGGRARYRECLKNHAVGIGGHALDGCGEFMAAGMEGTLDALKCAACSCHRNFHRKE 97

Query: 269 TPIA-----GSGDPYLLTXXXXXXXXXXPQFAAYYRTPAGYLHVAGQQR----AGTLALP 117
              +       GDPYL+           PQFAAYYR PAGYLHVAGQQ      GTLALP
Sbjct: 98  ADSSAVVAFSGGDPYLI-----PHHHPPPQFAAYYRHPAGYLHVAGQQHRSAVGGTLALP 152

Query: 116 XXXXXXXXXTQSTREDQEEDVSNPSAGGGGSSKKRFRT 3
                    TQSTREDQE+  +NPSAGG G SKKRFRT
Sbjct: 153 --STSGGGGTQSTREDQEDISNNPSAGGTG-SKKRFRT 187


>ref|XP_003517708.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 269

 Score =  181 bits (458), Expect = 7e-44
 Identities = 102/160 (63%), Positives = 111/160 (69%), Gaps = 11/160 (6%)
 Frame = -2

Query: 449 NSSSNSG---KVRYRECLKNHAVTIGGHALDGCGEFMAAGTEGTLDALKCAACNCHRNFH 279
           +SSSN G   + RYRECLKNHAV IGGHALDGCGEFMAAG EGTLDALKCAAC+CHRNFH
Sbjct: 37  SSSSNGGGCGRARYRECLKNHAVGIGGHALDGCGEFMAAGMEGTLDALKCAACSCHRNFH 96

Query: 278 RKETPIA-----GSGDPYLLTXXXXXXXXXXPQFAAYYRTPAGYLHVAGQQRA---GTLA 123
           RKE   +       GDPY L           PQF+ YYR PAGYLH+ GQ R+   GTLA
Sbjct: 97  RKEADSSAVVSLSGGDPYFLPHHHHHHHPPPPQFSGYYRHPAGYLHMGGQLRSAVGGTLA 156

Query: 122 LPXXXXXXXXXTQSTREDQEEDVSNPSAGGGGSSKKRFRT 3
           LP         TQSTREDQE+  +NPSAGG G SKKRFRT
Sbjct: 157 LP--STSGGGGTQSTREDQEDISNNPSAGGTG-SKKRFRT 193


>gb|AFK36118.1| unknown [Medicago truncatula]
          Length = 211

 Score =  178 bits (452), Expect = 4e-43
 Identities = 98/147 (66%), Positives = 109/147 (74%), Gaps = 7/147 (4%)
 Frame = -2

Query: 452 SNSSSN------SGKVRYRECLKNHAVTIGGHALDGCGEFMAAGTEGTLDALKCAACNCH 291
           +N +SN      +GK RYRECLKNHAV IGGHALDGCGEFM AG+EGTL++LKCAACNCH
Sbjct: 61  NNGNSNIGGVVGNGKARYRECLKNHAVGIGGHALDGCGEFMPAGSEGTLESLKCAACNCH 120

Query: 290 RNFHRKETPI-AGSGDPYLLTXXXXXXXXXXPQFAAYYRTPAGYLHVAGQQRAGTLALPX 114
           RNFHRKE+     +GDP+LLT          PQFAAYYRTPAGYLHV+GQQR GTLALP 
Sbjct: 121 RNFHRKESSADVTAGDPFLLT-HHHHHPPPPPQFAAYYRTPAGYLHVSGQQRTGTLALP- 178

Query: 113 XXXXXXXXTQSTREDQEEDVSNPSAGG 33
                   TQSTRE+  EDVSNPS GG
Sbjct: 179 STSGGGGGTQSTREEL-EDVSNPSGGG 204


>ref|XP_004143449.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Cucumis sativus]
           gi|449499790|ref|XP_004160918.1| PREDICTED: ZF-HD
           homeobox protein At4g24660-like [Cucumis sativus]
          Length = 248

 Score =  164 bits (414), Expect = 9e-39
 Identities = 95/162 (58%), Positives = 104/162 (64%), Gaps = 13/162 (8%)
 Frame = -2

Query: 449 NSSSNSGKVRYRECLKNHAVTIGGHALDGCGEFMAAGTEGTLDALKCAACNCHRNFHRKE 270
           +SS    K +YRECLKNHAV IGGHALDGCGEF+AAG EGTLDALKCAACNCHRNFHRKE
Sbjct: 43  SSSPGQRKPKYRECLKNHAVGIGGHALDGCGEFLAAGAEGTLDALKCAACNCHRNFHRKE 102

Query: 269 TPI---------AGSGDPYLLTXXXXXXXXXXPQFAAYYRTPAGYLHVAGQQRAGTLALP 117
           T            G G+P+LL            QF+ YYRTPAGYLHVA   R   LALP
Sbjct: 103 TDNNLNPAVGVGLGIGEPFLL--------PHPGQFSPYYRTPAGYLHVAPHHR--PLALP 152

Query: 116 XXXXXXXXXTQSTREDQEEDVSNPSAGGGGSS----KKRFRT 3
                       +RE+Q ED+SNPS GGGG S    KKRFRT
Sbjct: 153 ---STSGGGGTHSREEQ-EDMSNPSGGGGGGSSSFGKKRFRT 190


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