BLASTX nr result

ID: Glycyrrhiza24_contig00025995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025995
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621717.1| F-box protein [Medicago truncatula] gi|35549...   103   6e-32
ref|XP_003610961.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    80   4e-23
gb|AFK35052.1| unknown [Lotus japonicus]                               67   1e-21
ref|XP_003621725.1| F-box protein [Medicago truncatula] gi|35549...   108   1e-21
ref|XP_003603745.1| F-box/LRR-repeat protein [Medicago truncatul...    73   2e-21

>ref|XP_003621717.1| F-box protein [Medicago truncatula] gi|355496732|gb|AES77935.1|
           F-box protein [Medicago truncatula]
          Length = 431

 Score =  103 bits (258), Expect(2) = 6e-32
 Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 13/174 (7%)
 Frame = +3

Query: 3   LKTLHLREVQFLERRYVVEFLSACPVLEDLLMKFLKVPNSFMEIMNVGMLKPLPKLVRAD 182
           LK LHL +V FL+ +++++ LS  P+LEDLL+K L+V ++ +   +   LKP PKL+RAD
Sbjct: 197 LKILHLTQVHFLKLKFLIKILSMSPLLEDLLLKDLQVTDNTLAQDDAAALKPFPKLLRAD 256

Query: 183 ISKSNID---LPFKALCNAEFLRADVGFFFKPY--SFLNMTYMELIF-QPHYWVVLIDLL 344
           IS S I    LP K   N  FLR+ +    +     FL++T+++L F   +YW+ LI  +
Sbjct: 257 ISDSCISPLLLPLKLFYNVHFLRSQLQTLEEQQDTQFLSLTHLDLSFDHGYYWISLIKFI 316

Query: 345 RSCPSLQNLVIDKIEENIPYMRGGSFIDSLLDLE-------PQFVPCCLKAQLK 485
            +CPSLQ L I KI        GG +   LL  +       PQFVP C+ + L+
Sbjct: 317 CACPSLQTLTIRKI--------GGGY--GLLSNDDHNNWPHPQFVPQCISSHLQ 360



 Score = 59.7 bits (143), Expect(2) = 6e-32
 Identities = 34/68 (50%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
 Frame = +2

Query: 488 FCFRKYGGEEHELQFTSYVMQNARVLRCVTICSTGSSNFQKKLEMLKKLSVCPR----NS 655
           F F  YGG   ELQFT YV+QNA +LR VTI    SSN  K L+++K+L  C +    +S
Sbjct: 362 FSFINYGGNLSELQFTKYVVQNATLLRNVTIYRNTSSNPPKDLQIIKELHYCQKEKKEDS 421

Query: 656 TTCQLYFE 679
            T QL+FE
Sbjct: 422 VTHQLHFE 429


>ref|XP_003610961.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355512296|gb|AES93919.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 378

 Score = 80.1 bits (196), Expect(2) = 4e-23
 Identities = 57/165 (34%), Positives = 88/165 (53%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   LKTLHLREVQFLERRYVVEFLSACPVLEDLLMKFLKVPNSFMEIMNVGMLKPLPKLVRAD 182
           LK+L+L +V F  R  + +F   CP +ED+ +  L + NS +       ++ LPKLVRA 
Sbjct: 145 LKSLNLNDVVFGNRANMFDFFCGCPNVEDVEVTSLSIVNSRIPQPPEEGVEALPKLVRAK 204

Query: 183 ISKSNIDLPFKALCNAEFLRADVGFFFKPYSFLNMTYM----ELIFQPHYWVVLIDLLRS 350
           IS+ +  LP   LCNA+FL A V ++    +F N+ +M    ELI     W     +L++
Sbjct: 205 ISELHSMLPL--LCNAQFLYAGVSYWCCNPTFHNLIHMDITLELISCDVMWNWFAQVLQN 262

Query: 351 CPSLQNLVIDKIEENIPYMRGGSFIDSLLDLEPQFVPCCLKAQLK 485
           CP+LQNL + K      Y       + +   +PQ +P CL ++LK
Sbjct: 263 CPNLQNLTVQK-----KYACVKKHGNDVHWKDPQIIPQCLSSRLK 302



 Score = 53.9 bits (128), Expect(2) = 4e-23
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = +2

Query: 482 KKFCFRKYGGEEHELQFTSYVMQNARVLRCVTICSTGSSNFQKKLEMLKKLSVCPRNSTT 661
           K F F+ +   + E+QF  Y+MQN++VL+ +TI +T   +   K  ML+ LS+CP  S T
Sbjct: 302 KTFKFKSFNDFDCEVQFAKYIMQNSKVLQNMTIHTT--LDIDLKHPMLETLSLCPMGSAT 359

Query: 662 CQLYFE 679
           C L+F+
Sbjct: 360 CNLHFD 365


>gb|AFK35052.1| unknown [Lotus japonicus]
          Length = 220

 Score = 66.6 bits (161), Expect(2) = 1e-21
 Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
 Frame = +3

Query: 27  VQFLERRYVVEFLSACPVLEDLLMKFLKVPN--------SFMEIMNVGMLKPLPKLVRAD 182
           VQF+  ++++  L  CPVLEDL +  +   +        SF +    G +K L  LVRA 
Sbjct: 4   VQFINPQFLMNLLYGCPVLEDLEILHVYFDDSDLGSNDTSFNDSPFEGQVKSLSNLVRAK 63

Query: 183 I-SKSNIDLPFKALCNAEFL---RADVGFFFKPYSFLNMTYMELIFQPH--YWVVLIDLL 344
           +       +P KA  NA+FL   + D G    P    N+TY+E+ F+ H   W +++D+L
Sbjct: 64  VFFHLAFHIPVKAFSNAQFLHLNKCDAGIPVFP----NLTYLEISFKRHSLKWNLVLDML 119

Query: 345 RSCPSLQNLVID-KIEENIPYMRGGSFIDSLLDLEPQFVPCCLKAQLKNSVLE 500
             CP LQ +V D +++++  +             +P F+P C    L+   ++
Sbjct: 120 NHCPKLQTVVFDIRLDDDEVWP------------DPGFIPKCFSTHLRKCFIK 160



 Score = 62.4 bits (150), Expect(2) = 1e-21
 Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +2

Query: 491 CFRK-YGGEEHELQFTSYVMQNARVLRCVTICSTGSSNFQKKLEMLKKLSVCPRNSTTCQ 667
           CF K Y G + +++F  YV+QNA +LR + ICS  S N Q+KLEM+ +L+  PR+S  C+
Sbjct: 157 CFIKGYAGVDCQMRFARYVLQNATLLRSLIICSRYSQNHQRKLEMITELASYPRSSAVCE 216

Query: 668 LYFE 679
           L F+
Sbjct: 217 LLFK 220


>ref|XP_003621725.1| F-box protein [Medicago truncatula] gi|355496740|gb|AES77943.1|
           F-box protein [Medicago truncatula]
          Length = 409

 Score =  108 bits (269), Expect = 1e-21
 Identities = 71/191 (37%), Positives = 110/191 (57%), Gaps = 11/191 (5%)
 Frame = +3

Query: 3   LKTLHLREVQFLERRYVVEFLSACPVLEDLLMKFLKVPNSFMEIMNVGMLKPLPKLVRAD 182
           LK LHL +V FL+ +++++ LS  P+LEDLL+K L+V ++ +   +   LKP PKL+RAD
Sbjct: 197 LKILHLTQVHFLKLKFLIKILSMSPLLEDLLLKDLQVTDNTLAHDDAAALKPFPKLLRAD 256

Query: 183 ISKSNID---LPFKALCNAEFLRADVGF-----FFKPYSFLNMTYMELIFQP-HYWVVLI 335
           +S+S+I    LP K   N +FLR+ V        F    FLN+T+M+LIF   +YW+ L+
Sbjct: 257 VSESSISAFLLPLKLFYNVQFLRSQVLLQTLEQDFSTTQFLNLTHMDLIFHDGYYWISLM 316

Query: 336 DLLRSCPSLQNLVIDKIEENIPYMRGGSFIDSLLDLEPQFVPCCLKAQLKNSVLENMEV- 512
             + +CPSLQ L I  I        GG + D   + E QF    ++     ++L N+ + 
Sbjct: 317 KFICACPSLQTLTIHNI--------GGDYDDHNNNCELQFTKYVVQ---NATLLRNVTIY 365

Query: 513 -RNMSFNLQVM 542
             N S +LQ++
Sbjct: 366 SSNPSKDLQII 376


>ref|XP_003603745.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355492793|gb|AES73996.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 627

 Score = 72.8 bits (177), Expect(2) = 2e-21
 Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 11/178 (6%)
 Frame = +3

Query: 3   LKTLHLREVQFLERRYVVEFLSACPVLEDLLMKFLKV-PNSFMEIMNVGMLKPLPKLVRA 179
           LKTLHL  V F   + +++FL   P+LE+L    +KV P           +K LP LV A
Sbjct: 397 LKTLHLDSVTFNTHKQIIDFLLFFPILEELQTNKVKVFPLREFVPKTADKIKCLPNLVTA 456

Query: 180 DISKSNIDLPFKALCNAEFLRADVGF--FFKPYSFLNMTYMELIFQ------PHYWVVLI 335
            +S  N  +P   L  A  L   + +  +F+   F N+T MEL         P  W+ ++
Sbjct: 457 KLS-DNKPIPLFLLSRARSLSITLTWTHYFQVPIFYNLTQMELFSNLEGKSWPKKWMWML 515

Query: 336 DLLRSCPSLQNLVIDKIEENIPYMRGGSFIDSLLDL--EPQFVPCCLKAQLKNSVLEN 503
           ++L+  P LQ+L+I +  EN   +  G+  D   D+  +P+ VP CL +QLK  + +N
Sbjct: 516 EMLQHTPKLQHLIIHEEIEN--GIENGNDDDDDEDIWEDPKIVPECLSSQLKTYLFKN 571



 Score = 55.8 bits (133), Expect(2) = 2e-21
 Identities = 30/66 (45%), Positives = 42/66 (63%)
 Frame = +2

Query: 482 KKFCFRKYGGEEHELQFTSYVMQNARVLRCVTICSTGSSNFQKKLEMLKKLSVCPRNSTT 661
           K + F+ Y G++ ELQF  YVM++++VL  + I S  S +   K  ML+KLSVCPR    
Sbjct: 565 KTYLFKNYRGKKCELQFAEYVMRSSKVLCNMIIHSACSIDLNAKYRMLQKLSVCPRG--- 621

Query: 662 CQLYFE 679
           C+L FE
Sbjct: 622 CKLIFE 627


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