BLASTX nr result

ID: Glycyrrhiza24_contig00025991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025991
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Me...   129   4e-28
ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus c...   105   1e-20
ref|XP_004152199.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like ...    96   5e-18
ref|XP_002517629.1| conserved hypothetical protein [Ricinus comm...    92   9e-17

>ref|XP_003609345.1| EPIDERMAL PATTERNING FACTOR-like protein [Medicago truncatula]
           gi|355510400|gb|AES91542.1| EPIDERMAL PATTERNING
           FACTOR-like protein [Medicago truncatula]
          Length = 92

 Score =  129 bits (325), Expect = 4e-28
 Identities = 61/78 (78%), Positives = 66/78 (84%), Gaps = 3/78 (3%)
 Frame = +1

Query: 193 KKDGNYKGL-NQKKLVLGSRPPRCVNKCLSCRPCMAALVISPHHRVGHTHKA--NAERDE 363
           KK    KGL NQKK VLGSRPPRCVNKCL+CRPCMA LVISPHH+VG  HKA   AE+DE
Sbjct: 15  KKYHRSKGLINQKKSVLGSRPPRCVNKCLNCRPCMATLVISPHHKVGQIHKAKITAEKDE 74

Query: 364 GHYLLSWKCKCGNKFFQP 417
           G+YL+SWKCKCGNKFFQP
Sbjct: 75  GYYLMSWKCKCGNKFFQP 92


>ref|XP_002325220.1| predicted protein [Populus trichocarpa] gi|222866654|gb|EEF03785.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  110 bits (276), Expect = 2e-22
 Identities = 51/101 (50%), Positives = 71/101 (70%)
 Frame = +1

Query: 115 GLKTSVTLILIVSLTLFASNLAGSPSKKDGNYKGLNQKKLVLGSRPPRCVNKCLSCRPCM 294
           G++ +  +IL  SLT      A S     G+ + + QKK+VLGSRPP+CVN+C +C+PCM
Sbjct: 10  GIRITFIVILFFSLTFLPPVSAVSSMPSRGS-EDMKQKKMVLGSRPPQCVNRCSNCKPCM 68

Query: 295 AALVISPHHRVGHTHKANAERDEGHYLLSWKCKCGNKFFQP 417
           AALV  PHH+ G    ++++ DE +YLLSWKCKCG+K+FQP
Sbjct: 69  AALVTPPHHKNGVRGPSSSKGDESYYLLSWKCKCGDKYFQP 109


>ref|XP_002524507.1| hypothetical protein RCOM_0224470 [Ricinus communis]
           gi|223536295|gb|EEF37947.1| hypothetical protein
           RCOM_0224470 [Ricinus communis]
          Length = 108

 Score =  105 bits (261), Expect = 1e-20
 Identities = 57/116 (49%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
 Frame = +1

Query: 88  MYSPKLYPIGLKTS--VTLILIVSLTLFASN----LAGSPSKKDGNYKGLNQKKLVLGSR 249
           M S   YP GL     V L+ I  L  F+S     +  SP  +D + K   Q K+VLGSR
Sbjct: 1   MASLAYYPNGLTRIPLVILMFIFFLPFFSSTSVLTVGSSPYLRDNDGK---QMKMVLGSR 57

Query: 250 PPRCVNKCLSCRPCMAALVISPHHRVGHTHKANAERDEGHYLLSWKCKCGNKFFQP 417
           PP+C+N+CL+CRPCMAALV  PHH+      + +  DE +YLLSWKCKCG+K+FQP
Sbjct: 58  PPQCINRCLNCRPCMAALVTPPHHKT-----SLSRGDESYYLLSWKCKCGDKYFQP 108


>ref|XP_004152199.1| PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 8-like [Cucumis
           sativus] gi|449528391|ref|XP_004171188.1| PREDICTED:
           EPIDERMAL PATTERNING FACTOR-like protein 8-like [Cucumis
           sativus]
          Length = 106

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 52/113 (46%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
 Frame = +1

Query: 88  MYSPKLYPIGLKTSVTLILIVSLTLFASNLAGSPSKKDGNYKGLNQKKLVLGSRPPRCVN 267
           M SP    + L  +V   ++ SL L    L+G    +        QK+ VLGS+PPRCV 
Sbjct: 1   MASPTNNLLKLVVAVAFAVVFSLFLSLPTLSGVAEVES------LQKRTVLGSKPPRCVG 54

Query: 268 KCLSCRPCMAALVISPHHRVGHTHKAN---AERDEGHYLLSWKCKCGNKFFQP 417
           KCL+CRPC AALV+ P HR G   + N    E D+ +YLL WKCKCGNK +QP
Sbjct: 55  KCLNCRPCTAALVV-PEHREGKRFEGNLDHREEDDSYYLLHWKCKCGNKLYQP 106


>ref|XP_002517629.1| conserved hypothetical protein [Ricinus communis]
           gi|223543261|gb|EEF44793.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 66

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
 Frame = +1

Query: 232 LVLGSRPPRCVNKCLSCRPCMAALVISPHHRVGHTHKANAERD----EGHYLLSWKCKCG 399
           +VLGS+PP CVNKC SCRPCMA LV+  H +    HKA    D    +G+YLLSWKCKCG
Sbjct: 1   MVLGSKPPGCVNKCFSCRPCMATLVVPSHQKKSFPHKALPRHDDDDGDGYYLLSWKCKCG 60

Query: 400 NKFFQP 417
           +K FQP
Sbjct: 61  DKLFQP 66


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