BLASTX nr result

ID: Glycyrrhiza24_contig00025972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025972
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517915.1| PREDICTED: RING-H2 finger protein ATL51-like...   167   8e-40
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   167   8e-40
ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago trunc...   166   1e-39
gb|ACU17851.1| unknown [Glycine max]                                  166   2e-39
ref|XP_003530562.1| PREDICTED: E3 ubiquitin-protein ligase Os04g...   162   2e-38

>ref|XP_003517915.1| PREDICTED: RING-H2 finger protein ATL51-like [Glycine max]
          Length = 348

 Score =  167 bits (423), Expect = 8e-40
 Identities = 93/142 (65%), Positives = 104/142 (73%), Gaps = 6/142 (4%)
 Frame = +3

Query: 24  FEYPYDDDSSPNFSPLVVAVIGVLATAFLLITYYTIVSKYCTGHRESA---PNDHELQQN 194
           FEYP DDDSSPNFSPLV+A+IG+LATAFL+++YYT++SKYC G RESA   PN+  LQ N
Sbjct: 42  FEYP-DDDSSPNFSPLVIAIIGILATAFLVVSYYTLISKYC-GPRESARRDPNEDHLQDN 99

Query: 195 NNHEQP-PWHVVVPTTGLDESLIKSIAVFKYSKKDHGF--VVDRKNNDCCSVCLSEFQDG 365
            NH    P H     TGLDE+LIKSIAVF Y K   G   V D      CSVCLSEFQD 
Sbjct: 100 QNHNDTLPEHD--SNTGLDEALIKSIAVFNYKKGIGGSAGVTD------CSVCLSEFQDD 151

Query: 366 ESVRLLPKCNHAFHLPCIDTWL 431
           ESVRLLPKC+H FH PCIDTWL
Sbjct: 152 ESVRLLPKCSHVFHAPCIDTWL 173


>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 364

 Score =  167 bits (423), Expect = 8e-40
 Identities = 94/144 (65%), Positives = 110/144 (76%), Gaps = 8/144 (5%)
 Frame = +3

Query: 24  FEYPYDDDSSPNFSPLVVAVIGVLATAFLLITYYTIVSKYCTGHRESAPNDH-----ELQ 188
           FE+P DDDSSPNFSPLV+AVIGVL +AFLL++YYTI+SKYC G RES+ +++     EL+
Sbjct: 42  FEFP-DDDSSPNFSPLVIAVIGVLVSAFLLVSYYTIISKYC-GSRESSQSENHEENVELE 99

Query: 189 QNNN---HEQPPWHVVVPTTGLDESLIKSIAVFKYSKKDHGFVVDRKNNDCCSVCLSEFQ 359
           +++N   HE  PWH   PT GLDE+LIKSI V KY K D G V        CSVCLSEFQ
Sbjct: 100 EDHNPSLHE--PWH--APTIGLDEALIKSITVCKYKKGD-GLV----EVTDCSVCLSEFQ 150

Query: 360 DGESVRLLPKCNHAFHLPCIDTWL 431
           D ESVRLLPKC+HAFHLPCIDTWL
Sbjct: 151 DDESVRLLPKCSHAFHLPCIDTWL 174


>ref|XP_003612874.1| RING-H2 finger protein ATL3A [Medicago truncatula]
           gi|355514209|gb|AES95832.1| RING-H2 finger protein ATL3A
           [Medicago truncatula]
          Length = 481

 Score =  166 bits (421), Expect = 1e-39
 Identities = 90/146 (61%), Positives = 108/146 (73%), Gaps = 10/146 (6%)
 Frame = +3

Query: 24  FEYPYDDDSSPNFSPLVVAVIGVLATAFLLITYYTIVSKYCTGHRESA------PNDHEL 185
           FE+P D+DSSPNFSPLV+A+IG+LA+AFLL+TYYTI+SKYC G RES+       ND   
Sbjct: 44  FEFP-DEDSSPNFSPLVIAIIGILASAFLLVTYYTIISKYC-GRRESSASESREANDEFE 101

Query: 186 QQNNNHEQP----PWHVVVPTTGLDESLIKSIAVFKYSKKDHGFVVDRKNNDCCSVCLSE 353
             +++H  P    PWH  V T GLDE+LIKSI V KY K D   +VD  +   CSVCL+E
Sbjct: 102 DDHHHHHNPSIHEPWH--VSTNGLDETLIKSITVCKYKKNDG--LVDVTD---CSVCLNE 154

Query: 354 FQDGESVRLLPKCNHAFHLPCIDTWL 431
           FQD ES+RLLPKC+HAFHLPCIDTWL
Sbjct: 155 FQDDESIRLLPKCSHAFHLPCIDTWL 180


>gb|ACU17851.1| unknown [Glycine max]
          Length = 364

 Score =  166 bits (419), Expect = 2e-39
 Identities = 93/144 (64%), Positives = 109/144 (75%), Gaps = 8/144 (5%)
 Frame = +3

Query: 24  FEYPYDDDSSPNFSPLVVAVIGVLATAFLLITYYTIVSKYCTGHRESAPNDH-----ELQ 188
           FE+P DDDSSPNFSPLV+AVIGVL +AFLL++YYTI+SKYC G RES+ +++     EL+
Sbjct: 42  FEFP-DDDSSPNFSPLVIAVIGVLVSAFLLVSYYTIISKYC-GSRESSQSENHEENVELE 99

Query: 189 QNNN---HEQPPWHVVVPTTGLDESLIKSIAVFKYSKKDHGFVVDRKNNDCCSVCLSEFQ 359
           +++N   HE  PWH   PT GLDE+LIKSI V KY K D G V        CSVCL EFQ
Sbjct: 100 EDHNPSLHE--PWH--APTIGLDEALIKSITVCKYKKGD-GLV----EVTDCSVCLGEFQ 150

Query: 360 DGESVRLLPKCNHAFHLPCIDTWL 431
           D ESVRLLPKC+HAFHLPCIDTWL
Sbjct: 151 DDESVRLLPKCSHAFHLPCIDTWL 174


>ref|XP_003530562.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
           max]
          Length = 352

 Score =  162 bits (411), Expect = 2e-38
 Identities = 88/139 (63%), Positives = 100/139 (71%), Gaps = 3/139 (2%)
 Frame = +3

Query: 24  FEYPYDDDSSPNFSPLVVAVIGVLATAFLLITYYTIVSKYCTGHRESA---PNDHELQQN 194
           FEYP DDDSSPNFSPLV+A+IG+LATAFLL +YYT++SKYC G RESA   PND  LQ +
Sbjct: 42  FEYP-DDDSSPNFSPLVIAIIGILATAFLLASYYTLISKYC-GPRESARRDPNDENLQDD 99

Query: 195 NNHEQPPWHVVVPTTGLDESLIKSIAVFKYSKKDHGFVVDRKNNDCCSVCLSEFQDGESV 374
            NH            GLDE++IKSIAVFKY K   G +        CSVCLSEF+D ESV
Sbjct: 100 LNHNS-YLREHASIAGLDEAMIKSIAVFKYKK---GSIGGSAGVTDCSVCLSEFEDDESV 155

Query: 375 RLLPKCNHAFHLPCIDTWL 431
           RLLPKC+H FH PCIDTWL
Sbjct: 156 RLLPKCSHVFHAPCIDTWL 174


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