BLASTX nr result

ID: Glycyrrhiza24_contig00025970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025970
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553895.1| PREDICTED: F-box/kelch-repeat protein At3g06...   202   2e-50
ref|XP_003547680.1| PREDICTED: F-box/kelch-repeat protein At3g06...   198   4e-49
gb|ACU18590.1| unknown [Glycine max]                                  198   4e-49
ref|XP_003548542.1| PREDICTED: F-box/kelch-repeat protein At3g06...   182   2e-44
ref|XP_003614321.1| F-box/kelch-repeat protein [Medicago truncat...   164   9e-39

>ref|XP_003553895.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 405

 Score =  202 bits (514), Expect = 2e-50
 Identities = 100/141 (70%), Positives = 116/141 (82%)
 Frame = +1

Query: 70  MERLPRELVSSILTRLPVKELLRCKCVCKFWFDLITDSHFITNYHVIYNNNNCLTLQEEE 249
           ME LPRELVS++L+RLP K LL CKCVC  WFDLITD HF++NY+V+YN+       +EE
Sbjct: 3   MEHLPRELVSNVLSRLPAKVLLLCKCVCNSWFDLITDPHFVSNYYVVYNSLQ----SQEE 58

Query: 250 HARLLVIRRPFLSSLKTYISILSCGLNNNEPKKHNVSSDVLILPYEYNSDHKYWSEIMGP 429
           H  LLVIRRPF S LKTYIS+LS   N N+PKKH VSSDVL  PYEYNSDHKYW+EI+GP
Sbjct: 59  H--LLVIRRPFFSGLKTYISVLSW--NTNDPKKH-VSSDVLNPPYEYNSDHKYWTEILGP 113

Query: 430 CNGIYFLEGNPSVMMNPSLRQ 492
           CNGIYFLEGNP+V+MNPSLR+
Sbjct: 114 CNGIYFLEGNPNVLMNPSLRE 134


>ref|XP_003547680.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 405

 Score =  198 bits (503), Expect = 4e-49
 Identities = 99/139 (71%), Positives = 114/139 (82%)
 Frame = +1

Query: 70  MERLPRELVSSILTRLPVKELLRCKCVCKFWFDLITDSHFITNYHVIYNNNNCLTLQEEE 249
           ME LP ELVS++L+RLP K LL CKCVCK WFDLITD HF++NY+V+YN+       +EE
Sbjct: 3   MEHLPGELVSNVLSRLPSKVLLLCKCVCKSWFDLITDPHFVSNYYVVYNSLQ----SQEE 58

Query: 250 HARLLVIRRPFLSSLKTYISILSCGLNNNEPKKHNVSSDVLILPYEYNSDHKYWSEIMGP 429
           H  LLVIRRPF S LKTYIS+LS   N N+PKKH VSSDVL  PYEYNSDHKYW+EI+GP
Sbjct: 59  H--LLVIRRPFFSGLKTYISVLSW--NTNDPKKH-VSSDVLNPPYEYNSDHKYWTEILGP 113

Query: 430 CNGIYFLEGNPSVMMNPSL 486
           CNGIYFLEGNP+V+MNPSL
Sbjct: 114 CNGIYFLEGNPNVLMNPSL 132


>gb|ACU18590.1| unknown [Glycine max]
          Length = 405

 Score =  198 bits (503), Expect = 4e-49
 Identities = 99/139 (71%), Positives = 114/139 (82%)
 Frame = +1

Query: 70  MERLPRELVSSILTRLPVKELLRCKCVCKFWFDLITDSHFITNYHVIYNNNNCLTLQEEE 249
           ME LP ELVS++L+RLP K LL CKCVCK WFDLITD HF++NY+V+YN+       +EE
Sbjct: 3   MEHLPGELVSNVLSRLPSKVLLLCKCVCKSWFDLITDPHFVSNYYVVYNSLQ----SQEE 58

Query: 250 HARLLVIRRPFLSSLKTYISILSCGLNNNEPKKHNVSSDVLILPYEYNSDHKYWSEIMGP 429
           H  LLVIRRPF S LKTYIS+LS   N N+PKKH VSSDVL  PYEYNSDHKYW+EI+GP
Sbjct: 59  H--LLVIRRPFFSGLKTYISVLSW--NTNDPKKH-VSSDVLNPPYEYNSDHKYWTEILGP 113

Query: 430 CNGIYFLEGNPSVMMNPSL 486
           CNGIYFLEGNP+V+MNPSL
Sbjct: 114 CNGIYFLEGNPNVLMNPSL 132


>ref|XP_003548542.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 400

 Score =  182 bits (462), Expect = 2e-44
 Identities = 92/142 (64%), Positives = 116/142 (81%), Gaps = 2/142 (1%)
 Frame = +1

Query: 73  ERLPRELVSSILTRLPVKELLRCKCVCKFWFDLITDSHFITNYHVIYNNNNCLTLQEEEH 252
           + LP+ELVS+IL+RLP K+L++CK VCK WFDLITD HF+TN++V YNN      QEE+ 
Sbjct: 3   QHLPQELVSNILSRLPAKDLVKCKRVCKSWFDLITDYHFVTNHYVAYNNLMHYQSQEEQ- 61

Query: 253 ARLLVIRRPFLSSLKTYISILSCGLNNNEPKKHNVSSDVLI-LPYEY-NSDHKYWSEIMG 426
             LLVI RPF+S+LKT+IS+LSC  N N+P+K+++SS  L+ LP EY NS+HKYWSEI G
Sbjct: 62  --LLVIGRPFVSALKTHISLLSC--NTNDPQKNHISSSSLLNLPCEYNNSEHKYWSEISG 117

Query: 427 PCNGIYFLEGNPSVMMNPSLRQ 492
           PCNGIYFLEGNP+V+MNPSL Q
Sbjct: 118 PCNGIYFLEGNPNVLMNPSLGQ 139


>ref|XP_003614321.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355515656|gb|AES97279.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 392

 Score =  164 bits (414), Expect = 9e-39
 Identities = 87/141 (61%), Positives = 106/141 (75%)
 Frame = +1

Query: 70  MERLPRELVSSILTRLPVKELLRCKCVCKFWFDLITDSHFITNYHVIYNNNNCLTLQEEE 249
           ME LP ELVS+IL+RLP +ELL+ K VCK W++LITDSHF  NY+  +N        +EE
Sbjct: 1   MENLPHELVSNILSRLPSRELLKNKLVCKTWYNLITDSHFTNNYYSFHNQLQ----NQEE 56

Query: 250 HARLLVIRRPFLSSLKTYISILSCGLNNNEPKKHNVSSDVLILPYEYNSDHKYWSEIMGP 429
           H  LLVIRRPF+SSLKT IS+ S   N  +PKK NV S +L  P +YNS+HKYWSEIMGP
Sbjct: 57  H--LLVIRRPFISSLKTTISLHSSTFN--DPKK-NVCSSLLNPPEQYNSEHKYWSEIMGP 111

Query: 430 CNGIYFLEGNPSVMMNPSLRQ 492
           CNGIY L+GNP+V+MN SL+Q
Sbjct: 112 CNGIYLLQGNPNVLMNASLQQ 132


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