BLASTX nr result

ID: Glycyrrhiza24_contig00025966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025966
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614260.1| hypothetical protein MTR_5g047220 [Medicago ...   114   1e-23
ref|XP_002512032.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_002314918.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|NP_564950.1| uncharacterized protein [Arabidopsis thaliana] ...    56   3e-06
ref|XP_002887220.1| hypothetical protein ARALYDRAFT_476034 [Arab...    55   6e-06

>ref|XP_003614260.1| hypothetical protein MTR_5g047220 [Medicago truncatula]
           gi|355515595|gb|AES97218.1| hypothetical protein
           MTR_5g047220 [Medicago truncatula]
          Length = 97

 Score =  114 bits (284), Expect = 1e-23
 Identities = 63/100 (63%), Positives = 70/100 (70%)
 Frame = -3

Query: 399 MKDSSGIEFPGFQIYSHRDEFVFRNSMSRLQKRAPCPIQIKPCVISSSSTCSGAQXXXXX 220
           MK+S   EFPGFQIY+HRDE VFRNS SRLQKRAPCP+QI P +   SS+C+G Q     
Sbjct: 1   MKESVN-EFPGFQIYNHRDELVFRNSTSRLQKRAPCPLQINPNM--KSSSCNGTQNLIGN 57

Query: 219 XXXXXXXXXXXXSKDPIPLLSPLVVLESTSIREDNTAKSH 100
                       SK PIPLLSPLVVLESTSIRE+N AKSH
Sbjct: 58  GSTSSSLNSFFNSKGPIPLLSPLVVLESTSIREENPAKSH 97


>ref|XP_002512032.1| conserved hypothetical protein [Ricinus communis]
           gi|223549212|gb|EEF50701.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/110 (42%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
 Frame = -3

Query: 393 DSSGIEFPGFQIYSHRDEFVFRNSMSRLQKRAPCPIQIK----------PCVISSSSTCS 244
           D SG+ FPGFQ   H++EF +R ++SRLQ+RAP P+QIK          P  I  S T S
Sbjct: 2   DDSGVGFPGFQTCIHKEEFEYRKALSRLQRRAPSPLQIKPNAVLESQISPQAIGCSITSS 61

Query: 243 GAQXXXXXXXXXXXXXXXXXSKDPIPLLSPLV--VLESTSIREDNTAKSH 100
            +                  SKDPIPLLSPLV   L  ++  + NTAKSH
Sbjct: 62  TSTSTSTSMEEASSFNSFYHSKDPIPLLSPLVSPSLLQSAYLQGNTAKSH 111


>ref|XP_002314918.1| predicted protein [Populus trichocarpa] gi|222863958|gb|EEF01089.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 41/99 (41%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
 Frame = -3

Query: 393 DSSGIEFPGFQIYSHRDEFVFRNSMSRLQKRAPCPIQIKPCVISSSSTCSGAQXXXXXXX 214
           +  G EFPGFQ   H++E  +R  +SRLQ+RAPC +QIK     +   C  A        
Sbjct: 2   EDHGEEFPGFQTCVHKEELEYRRPLSRLQRRAPCQLQIK-VNNKAPLECKSAPKISSASA 60

Query: 213 XXXXXXXXXXSKDPIPLLSPLV---VLESTSIREDNTAK 106
                     SKDPIPLLSPLV   +LES+ I++ N  K
Sbjct: 61  ATSSFNSFYHSKDPIPLLSPLVLPSLLESSYIQQGNPPK 99


>ref|NP_564950.1| uncharacterized protein [Arabidopsis thaliana]
           gi|21617907|gb|AAM66957.1| unknown [Arabidopsis
           thaliana] gi|89111832|gb|ABD60688.1| At1g69050
           [Arabidopsis thaliana] gi|332196759|gb|AEE34880.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 94

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
 Frame = -3

Query: 399 MKDSS--GIEFPGFQIYSHRDEFVFRNSMS-RLQKRAPCPIQIKPCVISSS---STCSGA 238
           M+DS   G  FPGF++  H D+ VFR S+S RLQ+RAPCP+ + P    S+   ST +G 
Sbjct: 1   MEDSGRKGDPFPGFEMRVHNDDCVFRRSLSCRLQRRAPCPLLLPPRPPPSAEAPSTTTGV 60

Query: 237 QXXXXXXXXXXXXXXXXXSKDPIPLLSPLVVLESTSIREDNTAKSH 100
                               DPIPLLSPLV+   + ++ + T  SH
Sbjct: 61  S----------TSTFCQNGTDPIPLLSPLVL--PSMLQPNPTTTSH 94


>ref|XP_002887220.1| hypothetical protein ARALYDRAFT_476034 [Arabidopsis lyrata subsp.
           lyrata] gi|297333061|gb|EFH63479.1| hypothetical protein
           ARALYDRAFT_476034 [Arabidopsis lyrata subsp. lyrata]
          Length = 94

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
 Frame = -3

Query: 399 MKDSS--GIEFPGFQIYSHRDEFVFRNSMS-RLQKRAPCPIQIKPCVISSSSTCSGAQXX 229
           M+DS   G  FPGF++  H D+ VFR S+S RLQ+RAPCP+ + P    S+   S     
Sbjct: 1   MEDSGRKGDPFPGFEMRVHNDDCVFRRSLSCRLQRRAPCPLLLPPRPPPSAEAPS----- 55

Query: 228 XXXXXXXXXXXXXXXSKDPIPLLSPLVVLESTSIREDNTAKSH 100
                            DPIPLLSPLV+   + ++ + T  SH
Sbjct: 56  --TTTNVSASTFCQNGTDPIPLLSPLVL--PSMLQPNPTTTSH 94


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