BLASTX nr result

ID: Glycyrrhiza24_contig00025962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025962
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloro...    79   5e-13
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...    75   7e-12
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...    75   7e-12
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...    74   9e-12

>ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 656

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 11/77 (14%)
 Frame = +1

Query: 1   SSTRK---SFSSATALKSIFRP------QPPP--LIPELRRSKSFSASKNEALNAAFEPQ 147
           S+ RK   S ++A ALK+IFRP      +PPP   +PELRR+KSFSASKNEAL+  FEPQ
Sbjct: 62  SAARKPPTSSTAAAALKAIFRPSIAARNRPPPSSFLPELRRTKSFSASKNEALSGFFEPQ 121

Query: 148 RKSFDVRARGSLWNIFN 198
           RKS DVR R +L+++FN
Sbjct: 122 RKSCDVRGRSTLFSLFN 138


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 13/90 (14%)
 Frame = +1

Query: 1   SSTRKSFSSATALKSIFRPQPPP------------LIPELRRSKSFSASKNEALNAAFEP 144
           SS+RK  ++A ALK+IF+P  P               PELRR+KSFSASKNE  +  FEP
Sbjct: 54  SSSRKPTATA-ALKAIFKPPQPSSSNNNNNSSKSSFFPELRRTKSFSASKNEGFSGVFEP 112

Query: 145 QRKSFDVRARGSLWNIFN-NSERKIITNKE 231
           QRKS DVR R +LW++FN +SER     KE
Sbjct: 113 QRKSCDVRVRNTLWSLFNQDSERNPSVKKE 142


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 18/89 (20%)
 Frame = +1

Query: 1   SSTRK----SFSSATALKSIFRP--------------QPPPLIPELRRSKSFSASKNEAL 126
           +S+RK    S ++A ALK+IFRP              +P   +PELRR+KSFSASKNE  
Sbjct: 55  TSSRKPPINSSAAAAALKAIFRPSATGAGPGGLSGRNKPSSFLPELRRTKSFSASKNEGF 114

Query: 127 NAAFEPQRKSFDVRARGSLWNIFNNSERK 213
           +  FEPQRKS DVR R +LW +F   + +
Sbjct: 115 SGVFEPQRKSCDVRVRNTLWTLFTQDDER 143


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 18/89 (20%)
 Frame = +1

Query: 1   SSTRK----SFSSATALKSIFRP--------------QPPPLIPELRRSKSFSASKNEAL 126
           +S+RK    S ++A ALK+IFRP              +P   +PELRR+KSFSASKNE  
Sbjct: 55  TSSRKPPINSSAAAAALKAIFRPSATGAGPGGLSGRNKPSSFLPELRRTKSFSASKNEGF 114

Query: 127 NAAFEPQRKSFDVRARGSLWNIFNNSERK 213
           +  FEPQRKS DVR R +LW +F   + +
Sbjct: 115 SGVFEPQRKSCDVRVRNTLWTLFTQDDER 143


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 9/87 (10%)
 Frame = +1

Query: 1   SSTRK------SFSSATALKSIFRPQP---PPLIPELRRSKSFSASKNEALNAAFEPQRK 153
           SS+RK      + ++  ALK+IF+P     P   PELRR+KSFSASKNE  +  FEPQRK
Sbjct: 58  SSSRKPPPIPTTTTATAALKAIFKPSSSDRPSFFPELRRTKSFSASKNEGFSGVFEPQRK 117

Query: 154 SFDVRARGSLWNIFNNSERKIITNKEE 234
           S DVR R +LW++F   + +   +K++
Sbjct: 118 SCDVRVRSTLWSLFYQDDEQRNPSKKD 144


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