BLASTX nr result

ID: Glycyrrhiza24_contig00025934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025934
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513311.1| splicing endonuclease positive effector sen1...   189   3e-46
ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab...   156   2e-36
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p...   155   3e-36
ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi...   155   3e-36
emb|CBI18449.3| unnamed protein product [Vitis vinifera]              124   1e-26

>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
            communis] gi|223547219|gb|EEF48714.1| splicing
            endonuclease positive effector sen1, putative [Ricinus
            communis]
          Length = 2110

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/139 (67%), Positives = 112/139 (80%)
 Frame = +3

Query: 3    DFHLVRFVHDDGDSATGRSFSENDFVLLTKDPPQKSSHDVHMVGKVERREKNNKRSLSIV 182
            DFHLVRFVHDD  SA  + FSEND VLLTK+ PQ +SHDVHMVGKVERRE++NKR  S++
Sbjct: 989  DFHLVRFVHDDNVSALSKIFSENDLVLLTKEAPQSNSHDVHMVGKVERRERDNKRRASML 1048

Query: 183  LIRFYFQNGSARLNQARRNLTERSKWNACRIMSITPQIREFLALSSVKHIPLLPLILNPV 362
            LIRFYF NGS+RLNQAR+ L ERSKW+A RIMSITPQ+REF  LSS+K IP+L  IL PV
Sbjct: 1049 LIRFYFLNGSSRLNQARKQLLERSKWHASRIMSITPQLREFQVLSSIKDIPILSAILKPV 1108

Query: 363  KDSFCLDECKEIDLSKLCQ 419
            KDS   ++ +E+ L +L Q
Sbjct: 1109 KDSPGYNKSRELALGRLSQ 1127


>ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
            lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein
            ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata]
          Length = 2129

 Score =  156 bits (394), Expect = 2e-36
 Identities = 80/140 (57%), Positives = 102/140 (72%)
 Frame = +3

Query: 3    DFHLVRFVHDDGDSATGRSFSENDFVLLTKDPPQKSSHDVHMVGKVERREKNNKRSLSIV 182
            DFH VRF+ D+ D +  +SFSEND VL TK+ P+ S+  V+M+GKVE RE ++K+  SI+
Sbjct: 1048 DFHFVRFMQDENDGSNSKSFSENDLVLFTKEHPESSNVGVNMMGKVEGREWDDKKRSSIL 1107

Query: 183  LIRFYFQNGSARLNQARRNLTERSKWNACRIMSITPQIREFLALSSVKHIPLLPLILNPV 362
             +R Y QN S+RLNQARRNL ERS+W+A RI++IT QIREF ALSS+K IP+LPLIL+P 
Sbjct: 1108 NVRLYLQNASSRLNQARRNLLERSQWHASRILNITSQIREFQALSSIKDIPILPLILSPK 1167

Query: 363  KDSFCLDECKEIDLSKLCQS 422
             DS    E K  DL  L  S
Sbjct: 1168 SDSNYDSEVKRSDLRSLPHS 1187


>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
            [Arabidopsis thaliana]
          Length = 2142

 Score =  155 bits (392), Expect = 3e-36
 Identities = 79/140 (56%), Positives = 102/140 (72%)
 Frame = +3

Query: 3    DFHLVRFVHDDGDSATGRSFSENDFVLLTKDPPQKSSHDVHMVGKVERREKNNKRSLSIV 182
            DFH VRF+ D+ D +  +SFSEND VL TK+ P+ S+  V+M+GKVE RE ++K+  SI+
Sbjct: 1049 DFHFVRFMQDENDGSNSKSFSENDLVLFTKEHPENSNVGVNMMGKVEGREWDDKKRTSIL 1108

Query: 183  LIRFYFQNGSARLNQARRNLTERSKWNACRIMSITPQIREFLALSSVKHIPLLPLILNPV 362
             +R Y QN S+RLNQARRNL ERS+W+A RI++IT QIREF ALS +K IP+LPLIL+P+
Sbjct: 1109 NVRLYLQNASSRLNQARRNLLERSQWHASRILNITSQIREFQALSCIKDIPVLPLILSPM 1168

Query: 363  KDSFCLDECKEIDLSKLCQS 422
             DS    E K  DL  L  S
Sbjct: 1169 NDSNYDSEVKRSDLRSLPHS 1188


>ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
            gi|332191377|gb|AEE29498.1| hydrolase domain-containing
            protein [Arabidopsis thaliana]
          Length = 2127

 Score =  155 bits (392), Expect = 3e-36
 Identities = 79/140 (56%), Positives = 102/140 (72%)
 Frame = +3

Query: 3    DFHLVRFVHDDGDSATGRSFSENDFVLLTKDPPQKSSHDVHMVGKVERREKNNKRSLSIV 182
            DFH VRF+ D+ D +  +SFSEND VL TK+ P+ S+  V+M+GKVE RE ++K+  SI+
Sbjct: 1143 DFHFVRFMQDENDGSNSKSFSENDLVLFTKEHPENSNVGVNMMGKVEGREWDDKKRTSIL 1202

Query: 183  LIRFYFQNGSARLNQARRNLTERSKWNACRIMSITPQIREFLALSSVKHIPLLPLILNPV 362
             +R Y QN S+RLNQARRNL ERS+W+A RI++IT QIREF ALS +K IP+LPLIL+P+
Sbjct: 1203 NVRLYLQNASSRLNQARRNLLERSQWHASRILNITSQIREFQALSCIKDIPVLPLILSPM 1262

Query: 363  KDSFCLDECKEIDLSKLCQS 422
             DS    E K  DL  L  S
Sbjct: 1263 NDSNYDSEVKRSDLRSLPHS 1282


>emb|CBI18449.3| unnamed protein product [Vitis vinifera]
          Length = 2154

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/90 (66%), Positives = 72/90 (80%)
 Frame = +3

Query: 3    DFHLVRFVHDDGDSATGRSFSENDFVLLTKDPPQKSSHDVHMVGKVERREKNNKRSLSIV 182
            DFHLVR VHD  DSA  R+FSEND VLLT+ P Q SSH+VHMVGKVERREK++K   +++
Sbjct: 1331 DFHLVRCVHDGSDSAAYRTFSENDLVLLTRQPLQNSSHEVHMVGKVERREKDSKSRSNVL 1390

Query: 183  LIRFYFQNGSARLNQARRNLTERSKWNACR 272
            +IRFY QNGS+RLN+AR+ L ERSKW   R
Sbjct: 1391 VIRFYLQNGSSRLNRARKLLIERSKWYLSR 1420


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