BLASTX nr result

ID: Glycyrrhiza24_contig00025931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025931
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat...   108   3e-22
emb|CBI30347.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat...    99   4e-19
emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]    99   4e-19
ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat...    94   1e-17

>ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 566

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/60 (93%), Positives = 57/60 (95%)
 Frame = -2

Query: 222 DSELGEIVANRLFELEPQNAANYVLLSNIYAAAERWIDVSHVRSKMRERRVRKIPGCSKI 43
           DSELGEIVANRLFELEP NAANYVLLS+IYAAAERWIDVS VRSKMRERRVRKIPG SKI
Sbjct: 507 DSELGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRERRVRKIPGSSKI 566


>emb|CBI30347.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = -2

Query: 222 DSELGEIVANRLFELEPQNAANYVLLSNIYAAAERWIDVSHVRSKMRERRVRKIPGCSKI 43
           D ELGE+VA++LFELEPQNA NYVLLSNIYAAAE+W+DVS +R+KMRER +RKIPGCS I
Sbjct: 501 DIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 560


>ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = -2

Query: 222 DSELGEIVANRLFELEPQNAANYVLLSNIYAAAERWIDVSHVRSKMRERRVRKIPGCSKI 43
           D ELGE+VA++LFELEPQNA NYVLLSNIYAAAE+W+DVS +R+KMRER +RKIPGCS I
Sbjct: 502 DIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561


>emb|CAN66059.1| hypothetical protein VITISV_017037 [Vitis vinifera]
          Length = 546

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = -2

Query: 222 DSELGEIVANRLFELEPQNAANYVLLSNIYAAAERWIDVSHVRSKMRERRVRKIPGCSKI 43
           D ELGE+VA++LFELEPQNA NYVLLSNIYAAAE+W+DVS +R+KMRER +RKIPGCS I
Sbjct: 487 DIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 546


>ref|XP_004143391.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
           gi|449519310|ref|XP_004166678.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 565

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = -2

Query: 222 DSELGEIVANRLFELEPQNAANYVLLSNIYAAAERWIDVSHVRSKMRERRVRKIPGCSKI 43
           DSEL E+VA+RL E+EP+NA NYVLLSNIYAAA+RW+DVS VR++M ER +RKIPGCS I
Sbjct: 506 DSELAEVVASRLIEIEPENAGNYVLLSNIYAAADRWLDVSAVRNQMNERGLRKIPGCSWI 565


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