BLASTX nr result
ID: Glycyrrhiza24_contig00025926
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00025926 (228 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK48593.1| unknown [Lotus japonicus] 63 2e-08 gb|ABN09044.1| Ribonuclease H [Medicago truncatula] 60 1e-07 ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_003623700.1| hypothetical protein MTR_7g074660 [Medicago ... 59 5e-07 ref|XP_003630994.1| hypothetical protein MTR_8g105950 [Medicago ... 55 5e-06 >gb|AFK48593.1| unknown [Lotus japonicus] Length = 272 Score = 63.2 bits (152), Expect = 2e-08 Identities = 35/71 (49%), Positives = 43/71 (60%) Frame = +3 Query: 9 SPSDQLAALIRSIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGL 188 S + AAL+ I++L R W V L HTLREGNA AD L + A Q +VI E P GL Sbjct: 197 SSCHRYAALVWDIKDLQSRDWIVELRHTLREGNACADLLVKHGADQNDDLVITENPIAGL 256 Query: 189 GILLDGDAQRV 221 G+LL DA+ V Sbjct: 257 GVLLLADARGV 267 >gb|ABN09044.1| Ribonuclease H [Medicago truncatula] Length = 235 Score = 60.5 bits (145), Expect = 1e-07 Identities = 32/60 (53%), Positives = 40/60 (66%) Frame = +3 Query: 33 LIRSIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGLGILLDGDA 212 LI +I++LLRR W VSL HTL EGNA+ADFLA+ A +VIL PP + +L DA Sbjct: 168 LIMAIKKLLRRDWVVSLRHTLCEGNAAADFLAKKGALSDTSLVILNEAPPDIAFVLLADA 227 >ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|222858531|gb|EEE96078.1| predicted protein [Populus trichocarpa] Length = 1052 Score = 59.3 bits (142), Expect = 3e-07 Identities = 31/64 (48%), Positives = 40/64 (62%) Frame = +3 Query: 30 ALIRSIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGLGILLDGD 209 ALI I+ELLRR W V + HT RE N ADF+A+L+ S ++I + PP GL LL D Sbjct: 983 ALIFEIRELLRRDWTVRIEHTFREANFCADFMAKLATSCDNGLMIWDEPPQGLQQLLLAD 1042 Query: 210 AQRV 221 R+ Sbjct: 1043 IMRI 1046 >ref|XP_003623700.1| hypothetical protein MTR_7g074660 [Medicago truncatula] gi|124360296|gb|ABN08309.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago truncatula] gi|355498715|gb|AES79918.1| hypothetical protein MTR_7g074660 [Medicago truncatula] Length = 66 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/53 (54%), Positives = 36/53 (67%) Frame = +3 Query: 42 SIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGLGILL 200 +I+ELLRR W VSL HTLREGNA+ADFL + A +VIL PP + +L Sbjct: 2 TIKELLRRDWMVSLRHTLREGNAAADFLVKKGALSDSSLVILNEAPPDMACVL 54 >ref|XP_003630994.1| hypothetical protein MTR_8g105950 [Medicago truncatula] gi|355525016|gb|AET05470.1| hypothetical protein MTR_8g105950 [Medicago truncatula] Length = 245 Score = 55.5 bits (132), Expect = 5e-06 Identities = 30/60 (50%), Positives = 36/60 (60%) Frame = +3 Query: 33 LIRSIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGLGILLDGDA 212 LI +I+ LLRR W VSL HT REGN DFLA+ A +VIL PP + +L DA Sbjct: 180 LIIAIKHLLRRDWVVSLRHTFREGNVVVDFLAKEGALSDSSLVILNEAPPNITSVLLADA 239