BLASTX nr result

ID: Glycyrrhiza24_contig00025926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025926
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48593.1| unknown [Lotus japonicus]                               63   2e-08
gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    60   1e-07
ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_003623700.1| hypothetical protein MTR_7g074660 [Medicago ...    59   5e-07
ref|XP_003630994.1| hypothetical protein MTR_8g105950 [Medicago ...    55   5e-06

>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/71 (49%), Positives = 43/71 (60%)
 Frame = +3

Query: 9   SPSDQLAALIRSIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGL 188
           S   + AAL+  I++L  R W V L HTLREGNA AD L +  A Q   +VI E P  GL
Sbjct: 197 SSCHRYAALVWDIKDLQSRDWIVELRHTLREGNACADLLVKHGADQNDDLVITENPIAGL 256

Query: 189 GILLDGDAQRV 221
           G+LL  DA+ V
Sbjct: 257 GVLLLADARGV 267


>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/60 (53%), Positives = 40/60 (66%)
 Frame = +3

Query: 33  LIRSIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGLGILLDGDA 212
           LI +I++LLRR W VSL HTL EGNA+ADFLA+  A     +VIL   PP +  +L  DA
Sbjct: 168 LIMAIKKLLRRDWVVSLRHTLCEGNAAADFLAKKGALSDTSLVILNEAPPDIAFVLLADA 227


>ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|222858531|gb|EEE96078.1|
            predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/64 (48%), Positives = 40/64 (62%)
 Frame = +3

Query: 30   ALIRSIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGLGILLDGD 209
            ALI  I+ELLRR W V + HT RE N  ADF+A+L+ S    ++I + PP GL  LL  D
Sbjct: 983  ALIFEIRELLRRDWTVRIEHTFREANFCADFMAKLATSCDNGLMIWDEPPQGLQQLLLAD 1042

Query: 210  AQRV 221
              R+
Sbjct: 1043 IMRI 1046


>ref|XP_003623700.1| hypothetical protein MTR_7g074660 [Medicago truncatula]
           gi|124360296|gb|ABN08309.1| Polynucleotidyl transferase,
           Ribonuclease H fold [Medicago truncatula]
           gi|355498715|gb|AES79918.1| hypothetical protein
           MTR_7g074660 [Medicago truncatula]
          Length = 66

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/53 (54%), Positives = 36/53 (67%)
 Frame = +3

Query: 42  SIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGLGILL 200
           +I+ELLRR W VSL HTLREGNA+ADFL +  A     +VIL   PP +  +L
Sbjct: 2   TIKELLRRDWMVSLRHTLREGNAAADFLVKKGALSDSSLVILNEAPPDMACVL 54


>ref|XP_003630994.1| hypothetical protein MTR_8g105950 [Medicago truncatula]
           gi|355525016|gb|AET05470.1| hypothetical protein
           MTR_8g105950 [Medicago truncatula]
          Length = 245

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/60 (50%), Positives = 36/60 (60%)
 Frame = +3

Query: 33  LIRSIQELLRRSWDVSLTHTLREGNASADFLARLSASQLQPIVILEAPPPGLGILLDGDA 212
           LI +I+ LLRR W VSL HT REGN   DFLA+  A     +VIL   PP +  +L  DA
Sbjct: 180 LIIAIKHLLRRDWVVSLRHTFREGNVVVDFLAKEGALSDSSLVILNEAPPNITSVLLADA 239


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