BLASTX nr result

ID: Glycyrrhiza24_contig00025924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025924
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623167.1| Rop guanine nucleotide exchange factor [Medi...    95   7e-18
ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange f...    60   2e-07
emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera]    60   3e-07
ref|XP_002534083.1| Rop guanine nucleotide exchange factor, puta...    59   6e-07
ref|XP_004163866.1| PREDICTED: rop guanine nucleotide exchange f...    55   8e-06

>ref|XP_003623167.1| Rop guanine nucleotide exchange factor [Medicago truncatula]
           gi|355498182|gb|AES79385.1| Rop guanine nucleotide
           exchange factor [Medicago truncatula]
          Length = 695

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
 Frame = +2

Query: 14  MDSTITQLELREQTQQHLKK-QHCAPLVRLRRRSTTNPNPFAILVFWVSKSLRSLCFRVQ 190
           MD+T T+ +L++Q QQHLK  +H  PL+ L R  +TN NPF+ILV WV+KSL++LCFR+ 
Sbjct: 1   MDTTSTKHKLKQQKQQHLKHLKHYTPLLSLTR--STNSNPFSILVIWVTKSLKTLCFRLH 58

Query: 191 LSQGFCLRRIQYHHGMVINNTSVIYASSEEEGKEAVAAMEEGLSLAXXXXXXXXXXXXXX 370
            S GFCL++IQY HG+V  +T++                 EGLSLA              
Sbjct: 59  FSHGFCLKKIQY-HGIVYGSTTM-----------------EGLSLA----------DKNE 90

Query: 371 XXXXXXKGTFADLVEEKG 424
                 + TF DL+EEKG
Sbjct: 91  ENGVGKRETFCDLIEEKG 108


>ref|XP_002272910.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 701

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
 Frame = +2

Query: 14  MDSTITQLELREQTQQHLKKQHCAPLVRLRRRSTTNPNPFAILV-FWVSKSLRSLCFRVQ 190
           MD   TQ +  E  Q  L ++H   L  ++ +S+     F +L  FWVSK LR+LC R Q
Sbjct: 1   MDKAFTQHQRTEVPQ--LPRRHALCLPSVKPKSSNKSTAFLVLGRFWVSKYLRNLCCRGQ 58

Query: 191 LSQGFCLRRIQYHHGMVINNTSVIYASSEEEG-KEAVAAMEEGLSLAXXXXXXXXXXXXX 367
            S GFC+RRI++  GMV+NN+    +    EG  E    +E+G  +              
Sbjct: 59  FSNGFCVRRIRF-SGMVVNNSVFCDSPGFVEGATEMEGFIEKGEKVEERENGFGDSGGGI 117

Query: 368 XXXXXXXKGTFADLVEEKGR 427
                    TF  L+EE+GR
Sbjct: 118 E--------TFGSLLEEEGR 129


>emb|CAN84005.1| hypothetical protein VITISV_033733 [Vitis vinifera]
          Length = 640

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +2

Query: 14  MDSTITQLELREQTQQHLKKQHCAPLVRLRRRSTTNPNPFAILV-FWVSKSLRSLCFRVQ 190
           MD   TQ +  E  Q  L ++H   L  ++ +S+     F +L  FWVSK LR+LC R Q
Sbjct: 1   MDKAFTQHQRTEVPQ--LPRRHALCLPSVKPKSSNKSTAFLVLGRFWVSKYLRNLCCRGQ 58

Query: 191 LSQGFCLRRIQYHHGMVINNT 253
            S GFC+RRI++  GMV+NN+
Sbjct: 59  FSNGFCVRRIRF-SGMVVNNS 78


>ref|XP_002534083.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
           gi|223525876|gb|EEF28299.1| Rop guanine nucleotide
           exchange factor, putative [Ricinus communis]
          Length = 673

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
 Frame = +2

Query: 2   FDNFMDSTITQLELREQT---QQHLKKQHCAPLVRLRRRSTTNPNPFAILVFWVSKSLRS 172
           F+   ++T  Q + ++Q    QQH   + C P  +LR    T  NP ++L FWVSKS+R+
Sbjct: 5   FNQQSETTQQQQQQQQQDIHYQQHYHLKLCVPFDKLR----TFNNPLSLLGFWVSKSVRN 60

Query: 173 LCFRVQLSQGFCLRRIQYHHGMVINNTSVIYASSEEEGKE 292
           L  +   S GFC +R+ +  GMVINN+   +   E    E
Sbjct: 61  LYNKAPFSHGFCCKRLHF-TGMVINNSVFEFPEKENAAME 99


>ref|XP_004163866.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Cucumis
           sativus]
          Length = 572

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
 Frame = +2

Query: 35  LELREQTQQHLKKQHCAPLVRLRRRSTTNPNPFAILVFWVSKSLRSLCFRVQLSQGFCLR 214
           ++L    QQH +     PL  L    +   NPF+ L  WVSKS R LC R + S GFC R
Sbjct: 1   MDLTFTHQQHTEP---IPLTNLSPTPSVCFNPFSNLGNWVSKSARKLCHRPRFSSGFCCR 57

Query: 215 RIQYHHGMVINNTSVI-YASSEEEGKE 292
            ++Y  GMV+NN++ +   + E E KE
Sbjct: 58  GLEY-RGMVVNNSAFLEVVAMEIEVKE 83


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