BLASTX nr result

ID: Glycyrrhiza24_contig00025903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025903
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629138.1| TMV resistance protein N [Medicago truncatul...    83   3e-14
ref|XP_003626930.1| TMV resistance protein N [Medicago truncatul...    83   3e-14
ref|XP_003638286.1| TIR-NBS-LRR type disease resistance protein ...    80   2e-13
ref|XP_003626928.1| NBS-containing resistance-like protein [Medi...    79   3e-13
ref|XP_003626917.1| hypothetical protein MTR_8g012000, partial [...    79   3e-13

>ref|XP_003629138.1| TMV resistance protein N [Medicago truncatula]
            gi|355523160|gb|AET03614.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1084

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/62 (66%), Positives = 47/62 (75%)
 Frame = +2

Query: 5    GVGDNVEILVAFGHGLTVKETAVYLIYSRSVTMEIETSTDEKMEPSLEEEVQPSPNVNME 184
            GVGDNVE+ VA GHGLTVKETAVYL+Y +S  MEI  S   ++EP  E E+QPSPNV  E
Sbjct: 975  GVGDNVEVFVAIGHGLTVKETAVYLVYDQSNAMEIVPSNIMEIEPLHEVEMQPSPNVKTE 1034

Query: 185  PS 190
            PS
Sbjct: 1035 PS 1036


>ref|XP_003626930.1| TMV resistance protein N [Medicago truncatula]
            gi|355520952|gb|AET01406.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1091

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/63 (68%), Positives = 49/63 (77%)
 Frame = +2

Query: 2    LGVGDNVEILVAFGHGLTVKETAVYLIYSRSVTMEIETSTDEKMEPSLEEEVQPSPNVNM 181
            LGVGDNVEI VAFGHGLT KETAVYLIY +S  MEIE+S   ++EP  E +VQ SP+V M
Sbjct: 981  LGVGDNVEIFVAFGHGLTAKETAVYLIYDQSTAMEIESSIAMEVEPIPEVQVQSSPDVVM 1040

Query: 182  EPS 190
            E S
Sbjct: 1041 ELS 1043


>ref|XP_003638286.1| TIR-NBS-LRR type disease resistance protein [Medicago truncatula]
            gi|355504221|gb|AES85424.1| TIR-NBS-LRR type disease
            resistance protein [Medicago truncatula]
          Length = 1074

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 8/75 (10%)
 Frame = +2

Query: 2    LGVGDNVEILVAFGHGLTVKETAVYLIYSRSVT--------MEIETSTDEKMEPSLEEEV 157
            LG GD VEI V FG GL VKETAVYL+Y +S+T        ME+E ST+ +MEPS E  V
Sbjct: 891  LGPGDKVEIFVLFGCGLIVKETAVYLLYGQSITTEFEQSIFMEVEPSTNMEMEPSAELNV 950

Query: 158  QPSPNVNMEPSLIVK 202
            QPSP V+M+PS  VK
Sbjct: 951  QPSPKVSMQPSPNVK 965


>ref|XP_003626928.1| NBS-containing resistance-like protein [Medicago truncatula]
            gi|355520950|gb|AET01404.1| NBS-containing
            resistance-like protein [Medicago truncatula]
          Length = 1087

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 42/71 (59%), Positives = 50/71 (70%), Gaps = 8/71 (11%)
 Frame = +2

Query: 2    LGVGDNVEILVAFGHGLTVKETAVYLIYSRSVTMEIET--------STDEKMEPSLEEEV 157
            LGVGDNVEI V+ GHG TVK+  VYLIY +S  MEIE+        S+D KMEP  E E+
Sbjct: 969  LGVGDNVEIFVSIGHGWTVKKMTVYLIYDQSNAMEIESSNAMEVAPSSDAKMEPLHEVEL 1028

Query: 158  QPSPNVNMEPS 190
            +PSPNV M+PS
Sbjct: 1029 KPSPNVKMDPS 1039


>ref|XP_003626917.1| hypothetical protein MTR_8g012000, partial [Medicago truncatula]
           gi|355520939|gb|AET01393.1| hypothetical protein
           MTR_8g012000, partial [Medicago truncatula]
          Length = 255

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 45/75 (60%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
 Frame = +2

Query: 2   LGVGDNVEILVAFGHGLTVKETAVYLIYSRSVTMEIET--------STDEKMEPSLEEEV 157
           LGVGDN+EI V  GHG TVKET VYLIY +S  MEIE+        STD KMEP  E E 
Sbjct: 105 LGVGDNLEIFVVIGHGWTVKETNVYLIYDQSNAMEIESSNTMEVDPSTDAKMEPLHEVEF 164

Query: 158 QPSPNVNMEPSLIVK 202
           QPSPNV  E S  V+
Sbjct: 165 QPSPNVKTETSAEVE 179


Top