BLASTX nr result

ID: Glycyrrhiza24_contig00025898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025898
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-...   368   e-100
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   334   2e-89
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...   324   2e-86
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|...   323   2e-86
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...   322   5e-86

>ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 756

 Score =  368 bits (945), Expect = e-100
 Identities = 187/273 (68%), Positives = 224/273 (82%), Gaps = 3/273 (1%)
 Frame = +3

Query: 3    DIPLCKVLEAITAKECQEDFDYDSLETLGDSFLKYVASQQLFKTYQNYREGPLTEERKKM 182
            DIP+ KVL+AITAK C+E +DYD LETLGDS+LKY+ SQQLFKT QN REG L+++RK +
Sbjct: 328  DIPISKVLQAITAKGCEEAYDYDYLETLGDSYLKYIVSQQLFKTNQNDREGALSDKRKNI 387

Query: 183  ISNDALFDYGCSHKLPGFIQRDFFKPKEWIVPGDDKSKNISLKEELVSSRTRVYVHRTRK 362
            ISND LF YGC+  LPGFI++D F PK+W VPGD  +  + LK++L SSRTRVYV +TR+
Sbjct: 388  ISNDVLFKYGCTRPLPGFIRKDKFDPKQWDVPGDKSNSILLLKQKLDSSRTRVYVRKTRE 447

Query: 363  IQLKVVADVVEALIGAFLSTGDEEAALSFINWIGIKIDTNIIPY--ERHLS-IAPQKLVK 533
            I L ++ADVVEALIGAF+ST DE+AALSFINWIGI +DTNI+PY  ERH+S IAP++LVK
Sbjct: 448  IDLGIIADVVEALIGAFISTEDEKAALSFINWIGINVDTNIMPYENERHISIIAPEELVK 507

Query: 534  VNHLESLLNYSFHDPSLLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFYNT 713
               L+S LNYSF DP LLVEALTH S KRPEI  C  Y+RLEFLGDAVLDY+IT+HFY  
Sbjct: 508  AKLLKSRLNYSFKDPYLLVEALTHSSGKRPEIRTC--YERLEFLGDAVLDYVITMHFYKE 565

Query: 714  YPADKLSSELLTDMRSISVNNECYALSAVRAKL 812
            Y  DK S+E  T+MRSISVNNECYALSA++AKL
Sbjct: 566  YSNDKFSAEFFTNMRSISVNNECYALSAIKAKL 598


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score =  334 bits (856), Expect = 2e-89
 Identities = 172/270 (63%), Positives = 204/270 (75%)
 Frame = +3

Query: 3    DIPLCKVLEAITAKECQEDFDYDSLETLGDSFLKYVASQQLFKTYQNYREGPLTEERKKM 182
            DIP  KVLEAIT K+CQE F  +SLETLGDSFLKY ASQQLFK YQN+ EG L+ +++K+
Sbjct: 979  DIPAMKVLEAITTKKCQEKFHLESLETLGDSFLKYAASQQLFKLYQNHHEGLLSMKKEKI 1038

Query: 183  ISNDALFDYGCSHKLPGFIQRDFFKPKEWIVPGDDKSKNISLKEELVSSRTRVYVHRTRK 362
            ISN AL   GC HKLPGFI+ + F PK W++PGD    ++ L EE +S   ++YV   RK
Sbjct: 1039 ISNAALCRRGCDHKLPGFIRNESFDPKLWMIPGDKCGSDL-LSEEPLSECRKIYVRGRRK 1097

Query: 363  IQLKVVADVVEALIGAFLSTGDEEAALSFINWIGIKIDTNIIPYERHLSIAPQKLVKVNH 542
            ++ K VADVVEALIGA+LSTG E  AL F++WIGIK+D  I+PYERH  +  +K V V +
Sbjct: 1098 VKSKTVADVVEALIGAYLSTGGEVLALFFMDWIGIKVDFMIVPYERHFQLQAEKFVNVRY 1157

Query: 543  LESLLNYSFHDPSLLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFYNTYPA 722
            LESLLNYSF DPSLLVEALTHGSY  PEIP C  YQRLEFLGDAVLDYLIT+H Y  YP 
Sbjct: 1158 LESLLNYSFRDPSLLVEALTHGSYMLPEIPSC--YQRLEFLGDAVLDYLITMHLYKEYPG 1215

Query: 723  DKLSSELLTDMRSISVNNECYALSAVRAKL 812
              +S  LLTD+RS SVNN+CYA SAV+  L
Sbjct: 1216 --MSPGLLTDLRSASVNNDCYAQSAVKGDL 1243


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  324 bits (830), Expect = 2e-86
 Identities = 168/267 (62%), Positives = 203/267 (76%)
 Frame = +3

Query: 3    DIPLCKVLEAITAKECQEDFDYDSLETLGDSFLKYVASQQLFKTYQNYREGPLTEERKKM 182
            +I   KVLEAIT K C+E F Y+SLETLGDSFLKY ASQQLFKTY N+ EG L+ +R+K+
Sbjct: 970  EIQTIKVLEAITTKRCKEAFHYESLETLGDSFLKYAASQQLFKTYHNHHEGLLSLKREKI 1029

Query: 183  ISNDALFDYGCSHKLPGFIQRDFFKPKEWIVPGDDKSKNISLKEELVSSRTRVYVHRTRK 362
            ISN AL   GCS  LPGFI+ + F P  WI+PGD K ++  LKE +   +T +YV   RK
Sbjct: 1030 ISNAALCKLGCSSGLPGFIRNEPFDPNTWIIPGD-KPRSFKLKELVAKGKT-IYVSGKRK 1087

Query: 363  IQLKVVADVVEALIGAFLSTGDEEAALSFINWIGIKIDTNIIPYERHLSIAPQKLVKVNH 542
            ++ K+VADVVEALIGAFLSTG E+AAL F++W+GIK+  N IPY+RH  I P+KLV V+ 
Sbjct: 1088 LRQKIVADVVEALIGAFLSTGGEKAALLFMDWVGIKVSFNKIPYDRHFDIQPEKLVNVSF 1147

Query: 543  LESLLNYSFHDPSLLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFYNTYPA 722
            LES LNYSFHD SLLVEA+THGSY  PE+P C  YQRLEFLGD+VLDYLIT H YN YP 
Sbjct: 1148 LESQLNYSFHDRSLLVEAVTHGSYMLPEVPRC--YQRLEFLGDSVLDYLITWHLYNKYPG 1205

Query: 723  DKLSSELLTDMRSISVNNECYALSAVR 803
              ++   LTDMRS SVNN+CYA SA++
Sbjct: 1206 --MTPGQLTDMRSASVNNDCYAWSAIK 1230


>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1468

 Score =  323 bits (829), Expect = 2e-86
 Identities = 167/270 (61%), Positives = 203/270 (75%)
 Frame = +3

Query: 3    DIPLCKVLEAITAKECQEDFDYDSLETLGDSFLKYVASQQLFKTYQNYREGPLTEERKKM 182
            +IP  KVLEAIT  +CQE+F+ +SLETLGDSFLKY ASQQLFK YQN+ EG L+ ++ K+
Sbjct: 1040 NIPSMKVLEAITTNKCQENFNLESLETLGDSFLKYAASQQLFKIYQNHHEGLLSFKKDKI 1099

Query: 183  ISNDALFDYGCSHKLPGFIQRDFFKPKEWIVPGDDKSKNISLKEELVSSRTRVYVHRTRK 362
            ISN AL   GC+HKL GFI+ + F PK WI+PG     +  L EE +S   ++Y+   RK
Sbjct: 1100 ISNAALCRRGCNHKLQGFIRNESFDPKLWIIPGGKLGSDF-LSEEPLSKGRKIYIRGRRK 1158

Query: 363  IQLKVVADVVEALIGAFLSTGDEEAALSFINWIGIKIDTNIIPYERHLSIAPQKLVKVNH 542
            ++ K +ADVVEALIGA+LSTG E  AL F++WIGIK+D    PYERH+ +  +K V V +
Sbjct: 1159 VKSKTIADVVEALIGAYLSTGGEVTALLFMDWIGIKVDFMNTPYERHIQLQAEKFVNVRY 1218

Query: 543  LESLLNYSFHDPSLLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFYNTYPA 722
            LESLLNYSF+DPSLLVEALTHGSY  PEIP C  YQRLEFLGDAVLDYLIT+H Y  YP 
Sbjct: 1219 LESLLNYSFNDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLITLHMYKEYPG 1276

Query: 723  DKLSSELLTDMRSISVNNECYALSAVRAKL 812
              +S  LLTD+RS SVNN+CYALSAV+  L
Sbjct: 1277 --MSPGLLTDLRSASVNNDCYALSAVKVGL 1304


>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score =  322 bits (826), Expect = 5e-86
 Identities = 165/270 (61%), Positives = 205/270 (75%)
 Frame = +3

Query: 3    DIPLCKVLEAITAKECQEDFDYDSLETLGDSFLKYVASQQLFKTYQNYREGPLTEERKKM 182
            DIP  KVLEAIT K CQE F  +SLETLGDSFLKY ASQQLFKT+QN+ EG L+ +++++
Sbjct: 973  DIPTFKVLEAITTKHCQEGFHLESLETLGDSFLKYAASQQLFKTFQNHHEGLLSVKKERI 1032

Query: 183  ISNDALFDYGCSHKLPGFIQRDFFKPKEWIVPGDDKSKNISLKEELVSSRTRVYVHRTRK 362
            ISN +L   GC  KLPGFI+ + F PK+WI+ GD    ++   EEL+SS  ++YV   RK
Sbjct: 1033 ISNASLCKLGCDRKLPGFIRNESFDPKKWIIAGDQSRSHV-FGEELLSSTRKIYVSERRK 1091

Query: 363  IQLKVVADVVEALIGAFLSTGDEEAALSFINWIGIKIDTNIIPYERHLSIAPQKLVKVNH 542
            ++ K +ADVVEALIGAFLSTG E AAL F+ W+GI +D   +PY+R   +  ++ V V++
Sbjct: 1092 LKSKRIADVVEALIGAFLSTGGETAALIFMRWLGINVDFVKVPYKRDFPVILKRHVNVSY 1151

Query: 543  LESLLNYSFHDPSLLVEALTHGSYKRPEIPGCYNYQRLEFLGDAVLDYLITVHFYNTYPA 722
            LES+LNYSF DPSLLVEALTHGSY  PEIP C  YQRLEFLGDAVLDYL+T+H Y+ YP 
Sbjct: 1152 LESILNYSFRDPSLLVEALTHGSYMLPEIPRC--YQRLEFLGDAVLDYLMTMHLYHKYPG 1209

Query: 723  DKLSSELLTDMRSISVNNECYALSAVRAKL 812
              +S  LLTD+RS SVNN+CYA SAV+AKL
Sbjct: 1210 --MSPGLLTDLRSASVNNDCYAQSAVKAKL 1237


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