BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025897
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610363.1| Pentatricopeptide repeat-containing protein ...   122   4e-26
ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containi...    99   5e-19
ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]    92   3e-17
ref|XP_002510620.1| pentatricopeptide repeat-containing protein,...    91   7e-17

>ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511418|gb|AES92560.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  122 bits (305), Expect = 4e-26
 Identities = 66/107 (61%), Positives = 78/107 (72%), Gaps = 4/107 (3%)
 Frame = -1

Query: 310 QQRQVLTDLIDCTHRRDLLKGRALHACAFKNGSLSSCIYLANTLLNLYAKCGLLSHANVV 131
           Q RQ+L DLI+CTH +++LKGR LHA   K GS+SS IY+ NT LNLYAK   LSHA  +
Sbjct: 10  QHRQLLQDLIECTHNKNILKGRTLHARILKTGSISS-IYVTNTFLNLYAKTNHLSHALTL 68

Query: 130 FDDINDTHKDVVSWNSLINASSQHTPSSS----INLFRRMMRAHTTL 2
           FD IND  KD VSWNSLINA SQ+  SSS    I+LFRRMMRA+  +
Sbjct: 69  FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVI 115


>ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 58/107 (54%), Positives = 71/107 (66%), Gaps = 4/107 (3%)
 Frame = -1

Query: 310 QQRQVLTDLIDCTHRRDLLKGRALHACAFKNGSLSSCIYLANTLLNLYAKCGLLSHANVV 131
           Q  QVL  L+ CT  + L KGRALHA     GS SS   +AN+L+NLYAKC   S AN+V
Sbjct: 9   QHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSST-QIANSLINLYAKCSHFSKANLV 67

Query: 130 FDDINDTHKDVVSWNSLINASSQ---HTPSSSI-NLFRRMMRAHTTL 2
           FD IN  +KDVVSWN LINA SQ   H PS  + +LFR+++ AH T+
Sbjct: 68  FDSIN--NKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTI 112


>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
           protein product [Vitis vinifera]
          Length = 703

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 53/102 (51%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
 Frame = -1

Query: 304 RQVLTDLIDCTHRRDLLKGRALHACAFKNGSLSSCIYLANTLLNLYAKCGLLSHANVVFD 125
           R   T L+  TH R L KG+ALHA   K  S SSC+Y+AN+L+NLYAKC  L  A  VF+
Sbjct: 7   RSFFTALLQYTHNRSLQKGKALHAQIIK--SSSSCVYIANSLVNLYAKCQRLREAKFVFE 64

Query: 124 DINDTHKDVVSWNSLINASSQHTPSSS---INLFRRMMRAHT 8
            I   +KDVVSWN +IN  SQH PS S   + LF+RM   +T
Sbjct: 65  RIQ--NKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENT 104


>emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 53/102 (51%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
 Frame = -1

Query: 304 RQVLTDLIDCTHRRDLLKGRALHACAFKNGSLSSCIYLANTLLNLYAKCGLLSHANVVFD 125
           R   T L+  TH R L KG+ALHA   K  S SSC+Y+AN+L+NLYAKC  L  A  VF+
Sbjct: 7   RSFFTALLQYTHNRSLQKGKALHAQIIK--SSSSCVYIANSLVNLYAKCQRLREAKFVFE 64

Query: 124 DINDTHKDVVSWNSLINASSQHTPSSS---INLFRRMMRAHT 8
            I   +KDVVSWN +IN  SQH PS S   + LF+RM   +T
Sbjct: 65  RIQ--NKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENT 104


>ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551321|gb|EEF52807.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 51/99 (51%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
 Frame = -1

Query: 310 QQRQVLTDLIDCTHRRDLLKGRALHACAFKNGSLSSCIYLANTLLNLYAKCGLLSHANVV 131
           Q       L+  TH++ L KGRALHA   K  S SSCIYLAN+L+N YAKC  L  A +V
Sbjct: 6   QNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLV 65

Query: 130 FDDINDTHKDVVSWNSLINASSQHTPSSS---INLFRRM 23
           FD I+  +KDV+SWN LIN  SQ  P+ S   + LF+RM
Sbjct: 66  FDRIH--NKDVISWNCLINGYSQQGPTGSSFVMELFQRM 102