BLASTX nr result

ID: Glycyrrhiza24_contig00025894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025894
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003359360.2| photosystem I assembly protein Ycf3 (chlorop...   143   5e-32
ref|YP_007353767.1| photosystem I assembly protein Ycf3 (chlorop...   142   7e-32
ref|YP_007507112.1| photosystem I assembly protein Ycf3 (chlorop...   140   3e-31
ref|YP_007353916.1| photosystem I assembly protein Ycf3 (chlorop...   140   3e-31
ref|YP_007317249.1| photosystem I assembly protein Ycf3 (chlorop...   140   3e-31

>ref|YP_003359360.2| photosystem I assembly protein Ycf3 (chloroplast) [Olea europaea]
           gi|363413086|gb|ADA69927.2| photosystem I assembly
           protein Ycf3 (chloroplast) [Olea europaea]
          Length = 167

 Score =  143 bits (360), Expect = 5e-32
 Identities = 72/81 (88%), Positives = 73/81 (90%)
 Frame = +2

Query: 578 SGTEIL*TE*RP*RMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEH 757
           SG +   T  R  RMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEH
Sbjct: 30  SGEKEAFTYYRDERMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEH 89

Query: 758 TKALEYYFRALERNPFLPQAF 820
           TKALEYYFRALERNPFLPQAF
Sbjct: 90  TKALEYYFRALERNPFLPQAF 110


>ref|YP_007353767.1| photosystem I assembly protein Ycf3 (chloroplast) [Chrysanthemum x
           morifolium] gi|372863446|gb|AEX99515.1| photosystem I
           assembly protein Ycf3 (chloroplast) [Chrysanthemum
           indicum] gi|375298836|gb|AFA45275.1| photosystem I
           assembly protein Ycf3 (chloroplast) [Chrysanthemum x
           morifolium]
          Length = 167

 Score =  142 bits (359), Expect = 7e-32
 Identities = 68/68 (100%), Positives = 68/68 (100%)
 Frame = +2

Query: 617 RMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALER 796
           RMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALER
Sbjct: 42  RMSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALER 101

Query: 797 NPFLPQAF 820
           NPFLPQAF
Sbjct: 102 NPFLPQAF 109


>ref|YP_007507112.1| photosystem I assembly protein Ycf3 (chloroplast) [Salvia
           miltiorrhiza] gi|401879743|gb|AFQ30930.1| photosystem I
           assembly protein Ycf3 (chloroplast) [Salvia
           miltiorrhiza]
          Length = 169

 Score =  140 bits (354), Expect = 3e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 620 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 799
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 44  MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 103

Query: 800 PFLPQAF 820
           PFLPQAF
Sbjct: 104 PFLPQAF 110


>ref|YP_007353916.1| photosystem I assembly protein Ycf3 (chloroplast) [Tectona grandis]
           gi|438687605|emb|CCP47131.1| photosystem I assembly
           protein Ycf3 (chloroplast) [Tectona grandis]
           gi|438688289|emb|CCP47220.1| photosystem I assembly
           protein Ycf3 (chloroplast) [Tectona grandis]
           gi|438688413|emb|CCP47309.1| photosystem I assembly
           protein Ycf3 (chloroplast) [Tectona grandis]
          Length = 169

 Score =  140 bits (354), Expect = 3e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 620 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 799
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 44  MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 103

Query: 800 PFLPQAF 820
           PFLPQAF
Sbjct: 104 PFLPQAF 110


>ref|YP_007317249.1| photosystem I assembly protein Ycf3 (chloroplast) [Camellia
           sinensis] gi|430728273|gb|AGA55597.1| photosystem I
           assembly protein Ycf3 (chloroplast) [Camellia sinensis]
          Length = 168

 Score =  140 bits (354), Expect = 3e-31
 Identities = 67/67 (100%), Positives = 67/67 (100%)
 Frame = +2

Query: 620 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 799
           MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43  MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102

Query: 800 PFLPQAF 820
           PFLPQAF
Sbjct: 103 PFLPQAF 109


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