BLASTX nr result

ID: Glycyrrhiza24_contig00025890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025890
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43219.1| unknown [Lotus japonicus]                               79   3e-13
ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III s...    66   3e-09
ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycin...    64   1e-08
ref|XP_003626516.1| DNA-directed RNA polymerase subunit [Medicag...    64   1e-08
ref|XP_003612890.1| DNA-directed RNA polymerase subunit [Medicag...    64   2e-08

>gb|AFK43219.1| unknown [Lotus japonicus]
          Length = 111

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 33/39 (84%), Positives = 35/39 (89%)
 Frame = +1

Query: 1   PKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 117
           P C+HDKAAYTE Q RSADEPATIFY CLNEKCRHQWR+
Sbjct: 72  PNCSHDKAAYTEMQIRSADEPATIFYWCLNEKCRHQWRE 110


>ref|XP_003552163.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC10-like
           [Glycine max]
          Length = 111

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   PKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 117
           P C H KAA+ EFQTRSADEPAT+FY CLN  C+ QWR+
Sbjct: 72  PFCGHGKAAFKEFQTRSADEPATLFYKCLNNDCKKQWRE 110


>ref|NP_001238101.1| uncharacterized protein LOC100527062 [Glycine max]
           gi|255631470|gb|ACU16102.1| unknown [Glycine max]
          Length = 111

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   PKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 117
           P C H KAA+ EFQTRSAD PAT+FY CLN +C+ QWR+
Sbjct: 72  PFCGHGKAAFKEFQTRSADGPATLFYKCLNNECKKQWRE 110


>ref|XP_003626516.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
           gi|355501531|gb|AES82734.1| DNA-directed RNA polymerase
           subunit [Medicago truncatula]
          Length = 108

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   PKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 117
           P C H +A+Y   QTRSADEPATIFY C+N+KC HQW++
Sbjct: 69  PNCRHPQASYHMEQTRSADEPATIFYKCMNQKCEHQWKE 107


>ref|XP_003612890.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
           gi|355514225|gb|AES95848.1| DNA-directed RNA polymerase
           subunit [Medicago truncatula]
          Length = 106

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/39 (66%), Positives = 31/39 (79%)
 Frame = +1

Query: 1   PKCNHDKAAYTEFQTRSADEPATIFYLCLNEKCRHQWRD 117
           P C H +A+Y   QTRSADEPATIFY CLNEKC H+W++
Sbjct: 68  PNCRHPQASYHMQQTRSADEPATIFYECLNEKCGHKWKE 106


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