BLASTX nr result

ID: Glycyrrhiza24_contig00025889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025889
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544802.1| PREDICTED: uncharacterized protein LOC100791...    99   4e-19
ref|XP_003519589.1| PREDICTED: uncharacterized protein LOC100801...    99   4e-19
ref|XP_003617617.1| hypothetical protein MTR_5g093560 [Medicago ...    99   5e-19
ref|XP_002529444.1| RNA binding protein, putative [Ricinus commu...    87   1e-15
dbj|BAB08579.1| unnamed protein product [Arabidopsis thaliana]         82   5e-14

>ref|XP_003544802.1| PREDICTED: uncharacterized protein LOC100791165 [Glycine max]
          Length = 888

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/81 (66%), Positives = 56/81 (69%)
 Frame = +3

Query: 81  MDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDVXXXXXXXXXXXXXXXXXXX 260
           MDLEV GRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDV                   
Sbjct: 1   MDLEVAGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDV----RHLLSAPLPPRLKRR 56

Query: 261 XXXXEADLDYQRYLDLPSSSS 323
               E DLD+QRYLDLPSSS+
Sbjct: 57  PPPPEPDLDHQRYLDLPSSSA 77


>ref|XP_003519589.1| PREDICTED: uncharacterized protein LOC100801276 [Glycine max]
          Length = 908

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 55/80 (68%), Positives = 55/80 (68%)
 Frame = +3

Query: 81  MDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDVXXXXXXXXXXXXXXXXXXX 260
           MDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDV                   
Sbjct: 1   MDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDV----RHLLSAPLPPRLKRR 56

Query: 261 XXXXEADLDYQRYLDLPSSS 320
               E DLD QRYLDLPSSS
Sbjct: 57  PPPPEPDLDQQRYLDLPSSS 76


>ref|XP_003617617.1| hypothetical protein MTR_5g093560 [Medicago truncatula]
           gi|355518952|gb|AET00576.1| hypothetical protein
           MTR_5g093560 [Medicago truncatula]
          Length = 906

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 54/81 (66%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = +3

Query: 81  MDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDV-XXXXXXXXXXXXXXXXXX 257
           MDLEVVGRHAMLFDDDGMAAFVNS EALV+WNSLSIDRYDV                   
Sbjct: 1   MDLEVVGRHAMLFDDDGMAAFVNSPEALVDWNSLSIDRYDVRHLLSGPIPPRLKRRTHHP 60

Query: 258 XXXXXEADLDYQRYLDLPSSS 320
                EADLD+QRYLDLPSSS
Sbjct: 61  PQSSAEADLDHQRYLDLPSSS 81


>ref|XP_002529444.1| RNA binding protein, putative [Ricinus communis]
           gi|223531060|gb|EEF32910.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 915

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/88 (53%), Positives = 55/88 (62%), Gaps = 8/88 (9%)
 Frame = +3

Query: 81  MDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDV--------XXXXXXXXXXX 236
           MDLEV+GRHA+LFDDD +AAFVNS EALV+WNSLSIDRYDV                   
Sbjct: 1   MDLEVIGRHALLFDDDALAAFVNSPEALVDWNSLSIDRYDVRHLLSSPPPPRNRHHRRNQ 60

Query: 237 XXXXXXXXXXXXEADLDYQRYLDLPSSS 320
                       E+DLD++RYLDLPS+S
Sbjct: 61  HRSPSHNLDDSLESDLDHERYLDLPSTS 88


>dbj|BAB08579.1| unnamed protein product [Arabidopsis thaliana]
          Length = 875

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +3

Query: 78  SMDLEVVGRHAMLFDDDGMAAFVNSAEALVEWNSLSIDRYDV-XXXXXXXXXXXXXXXXX 254
           +MDLE+VGRHA+ FDDD MA FVNS  ALV+WNSL IDRYDV                  
Sbjct: 31  TMDLEIVGRHALFFDDDSMATFVNSPTALVDWNSLFIDRYDVRHLLSSPPPPRIKRRRPN 90

Query: 255 XXXXXXEADLDYQRYLDLPSSS 320
                 E++LD++RYLDLPS S
Sbjct: 91  SNDADLESELDHERYLDLPSES 112


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