BLASTX nr result

ID: Glycyrrhiza24_contig00025873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025873
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613044.1| SGT1-like protein [Medicago truncatula] gi|3...   215   3e-54
ref|XP_003534243.1| PREDICTED: protein SGT1 homolog At5g65490-li...   211   4e-53
ref|XP_002265187.2| PREDICTED: LOW QUALITY PROTEIN: protein SGT1...   197   1e-48
emb|CBI23527.3| unnamed protein product [Vitis vinifera]              197   1e-48
emb|CAN64607.1| hypothetical protein VITISV_030583 [Vitis vinifera]   194   5e-48

>ref|XP_003613044.1| SGT1-like protein [Medicago truncatula] gi|355514379|gb|AES96002.1|
           SGT1-like protein [Medicago truncatula]
          Length = 654

 Score =  215 bits (548), Expect = 3e-54
 Identities = 107/158 (67%), Positives = 119/158 (75%), Gaps = 2/158 (1%)
 Frame = +2

Query: 2   FPPSSSSI--SYDTVFYAIYPDSPXXXXXXXLQSLHLQILETVSPFTVDYIWQHQPFTLX 175
           FPPSSS+   S DTVFYAIYPDS        LQSLHLQIL+T+SP T DYIWQHQPFTL 
Sbjct: 3   FPPSSSTTMRSNDTVFYAIYPDSLTTTTATTLQSLHLQILQTISPLTTDYIWQHQPFTLS 62

Query: 176 XXXXXXXXXXXXXXXXLPHLHGHLRFGDNLDDEWFTVFLLFQISIRFPSLSLRIWDSDGE 355
                           LPHLHGHLR+GDNLDDEWFTVFLLF IS  FPSLS+R+WDSDGE
Sbjct: 63  LSIPPNPTSSN-----LPHLHGHLRYGDNLDDEWFTVFLLFHISSHFPSLSIRVWDSDGE 117

Query: 356 FLLIEAAFHLPRWLNPETSLHRVFLRSGDIHVIPPNIL 469
           FLLIEAAFHLPRWL+PE S +R+F+R+G IH+IP N L
Sbjct: 118 FLLIEAAFHLPRWLDPENSDNRIFIRNGHIHIIPRNRL 155


>ref|XP_003534243.1| PREDICTED: protein SGT1 homolog At5g65490-like [Glycine max]
          Length = 645

 Score =  211 bits (538), Expect = 4e-53
 Identities = 107/160 (66%), Positives = 120/160 (75%), Gaps = 6/160 (3%)
 Frame = +2

Query: 8   PSSSSI-----SYDTVFYAIYPDSPXXXXXXXLQSLHLQILETVSPFTVDYIWQHQPFTL 172
           PSSSSI     S DTVFYAIYPDSP       L+SLHL+ILET+SPFT DYIWQHQPFTL
Sbjct: 4   PSSSSIFSPRPSDDTVFYAIYPDSPTTTSTATLRSLHLKILETLSPFTEDYIWQHQPFTL 63

Query: 173 XXXXXXXXXXXXXXXXX-LPHLHGHLRFGDNLDDEWFTVFLLFQISIRFPSLSLRIWDSD 349
                             L HLHG LRFGDNLDDEWF VFLLF+IS RFPSLS+RIWDSD
Sbjct: 64  SVSTPPNPSCPCPSSSSHLLHLHGRLRFGDNLDDEWFAVFLLFRISQRFPSLSIRIWDSD 123

Query: 350 GEFLLIEAAFHLPRWLNPETSLHRVFLRSGDIHVIPPNIL 469
           G+FLLIEAAFHLPRWLNP+T+ HR+FLR+G +H++P N L
Sbjct: 124 GDFLLIEAAFHLPRWLNPDTAHHRLFLRNGSLHIVPRNRL 163


>ref|XP_002265187.2| PREDICTED: LOW QUALITY PROTEIN: protein SGT1 homolog At5g65490-like
           [Vitis vinifera]
          Length = 604

 Score =  197 bits (500), Expect = 1e-48
 Identities = 96/163 (58%), Positives = 116/163 (71%), Gaps = 7/163 (4%)
 Frame = +2

Query: 2   FPPSSSSISYDTVFYAIYPD-------SPXXXXXXXLQSLHLQILETVSPFTVDYIWQHQ 160
           F  +SS +  DTVFYAI+PD       SP       LQSLHLQIL T+SP T  YIWQH+
Sbjct: 10  FSQNSSKLPDDTVFYAIFPDFSLPVSKSPNPNITSLLQSLHLQILTTISPHTTHYIWQHE 69

Query: 161 PFTLXXXXXXXXXXXXXXXXXLPHLHGHLRFGDNLDDEWFTVFLLFQISIRFPSLSLRIW 340
           PFTL                 +PHL G+LRFGDNLDDEWF VFLLFQIS+ FPSLS+R+W
Sbjct: 70  PFTLSLSSPSST---------IPHLQGNLRFGDNLDDEWFIVFLLFQISLAFPSLSIRVW 120

Query: 341 DSDGEFLLIEAAFHLPRWLNPETSLHRVFLRSGDIHVIPPNIL 469
           D+DGEFLLIEAAFHLPRW+NPE S++RVF+R G++H++P + L
Sbjct: 121 DTDGEFLLIEAAFHLPRWINPENSVNRVFIRRGELHIVPKSRL 163


>emb|CBI23527.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  197 bits (500), Expect = 1e-48
 Identities = 96/163 (58%), Positives = 116/163 (71%), Gaps = 7/163 (4%)
 Frame = +2

Query: 2   FPPSSSSISYDTVFYAIYPD-------SPXXXXXXXLQSLHLQILETVSPFTVDYIWQHQ 160
           F  +SS +  DTVFYAI+PD       SP       LQSLHLQIL T+SP T  YIWQH+
Sbjct: 33  FSQNSSKLPDDTVFYAIFPDFSLPVSKSPNPNITSLLQSLHLQILTTISPHTTHYIWQHE 92

Query: 161 PFTLXXXXXXXXXXXXXXXXXLPHLHGHLRFGDNLDDEWFTVFLLFQISIRFPSLSLRIW 340
           PFTL                 +PHL G+LRFGDNLDDEWF VFLLFQIS+ FPSLS+R+W
Sbjct: 93  PFTLSLSSPSST---------IPHLQGNLRFGDNLDDEWFIVFLLFQISLAFPSLSIRVW 143

Query: 341 DSDGEFLLIEAAFHLPRWLNPETSLHRVFLRSGDIHVIPPNIL 469
           D+DGEFLLIEAAFHLPRW+NPE S++RVF+R G++H++P + L
Sbjct: 144 DTDGEFLLIEAAFHLPRWINPENSVNRVFIRRGELHIVPKSRL 186


>emb|CAN64607.1| hypothetical protein VITISV_030583 [Vitis vinifera]
          Length = 933

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/163 (58%), Positives = 115/163 (70%), Gaps = 7/163 (4%)
 Frame = +2

Query: 2   FPPSSSSISYDTVFYAIYPD-------SPXXXXXXXLQSLHLQILETVSPFTVDYIWQHQ 160
           F  +SS +  DTVFYAI+PD       SP       L SLHLQIL T+SP T  YIWQH+
Sbjct: 10  FSQNSSKLPDDTVFYAIFPDFSLPVSKSPNPNITSLLXSLHLQILTTISPHTTHYIWQHE 69

Query: 161 PFTLXXXXXXXXXXXXXXXXXLPHLHGHLRFGDNLDDEWFTVFLLFQISIRFPSLSLRIW 340
           PFTL                 +PHL G+LRFGDNLDDEWF VFLLFQIS+ FPSLS+R+W
Sbjct: 70  PFTLSLSSPSST---------IPHLQGNLRFGDNLDDEWFXVFLLFQISLAFPSLSIRVW 120

Query: 341 DSDGEFLLIEAAFHLPRWLNPETSLHRVFLRSGDIHVIPPNIL 469
           D+DGEFLLIEAAFHLPRW+NPE S++RVF+R G++H++P + L
Sbjct: 121 DTDGEFLLIEAAFHLPRWINPENSVNRVFIRRGELHIVPKSRL 163