BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025849
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525896.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   147   7e-34
ref|XP_003524036.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   145   3e-33
ref|XP_003549531.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   140   1e-31
ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29
ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, ch...   122   4e-26

>ref|XP_003525896.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 973

 Score =  147 bits (372), Expect = 7e-34
 Identities = 72/103 (69%), Positives = 80/103 (77%)
 Frame = -2

Query: 310 NGLIKSKRXXXXXXXXXXXESSPWSRATQAKLGTRLVELLLETAYVHSPVNQSVDTPPDI 131
           N L+K  R           E SPWSR TQAKLG+RLVELL++TAYVHSPVNQS DTPPDI
Sbjct: 295 NSLLKKNRLREVQMILRKEECSPWSRDTQAKLGSRLVELLIDTAYVHSPVNQSADTPPDI 354

Query: 130 RPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAKHI 2
           RPAFRHGFK +  +PGQK SKK GIIQCDPLVL G+EKCAKH+
Sbjct: 355 RPAFRHGFKAVPWHPGQKFSKKYGIIQCDPLVLVGLEKCAKHM 397


>ref|XP_003524036.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 1043

 Score =  145 bits (366), Expect = 3e-33
 Identities = 69/103 (66%), Positives = 80/103 (77%)
 Frame = -2

Query: 310 NGLIKSKRXXXXXXXXXXXESSPWSRATQAKLGTRLVELLLETAYVHSPVNQSVDTPPDI 131
           N L+K  R           E SPWS+ TQAKLG+RL+ELL++TAYVHSPVNQS DTPPDI
Sbjct: 365 NSLLKKNRLREVQMILRKEECSPWSQDTQAKLGSRLIELLIDTAYVHSPVNQSADTPPDI 424

Query: 130 RPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAKHI 2
           RPAFRHGFK +  +PGQK SKK G+IQCDPLVL G+EKCAKH+
Sbjct: 425 RPAFRHGFKAVPWHPGQKFSKKYGVIQCDPLVLVGLEKCAKHM 467


>ref|XP_003549531.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Glycine max]
          Length = 951

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/103 (65%), Positives = 79/103 (76%)
 Frame = -2

Query: 310 NGLIKSKRXXXXXXXXXXXESSPWSRATQAKLGTRLVELLLETAYVHSPVNQSVDTPPDI 131
           NGLIK +R           ES PW R TQAKLG+RL+ELL+ETA+VHSPVNQS DTPPDI
Sbjct: 272 NGLIKRRRLKQVQMLLKEKESGPWGRDTQAKLGSRLIELLIETAFVHSPVNQSADTPPDI 331

Query: 130 RPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAKHI 2
           RPAFRH FK +S+NP QKI K  G+I+CDPLVLAG++K  KH+
Sbjct: 332 RPAFRHKFKAISKNPEQKILKNYGVIECDPLVLAGMDKSVKHM 374


>ref|XP_002325119.1| predicted protein [Populus trichocarpa] gi|222866553|gb|EEF03684.1|
           predicted protein [Populus trichocarpa]
          Length = 882

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/103 (61%), Positives = 76/103 (73%)
 Frame = -2

Query: 310 NGLIKSKRXXXXXXXXXXXESSPWSRATQAKLGTRLVELLLETAYVHSPVNQSVDTPPDI 131
           N LI+ KR           E+ PWSR TQAKLG+RL+ELL ETAYV  PVNQS D PPD+
Sbjct: 204 NSLIRRKRLMEVQNLVKQDETKPWSRGTQAKLGSRLIELLTETAYVQPPVNQSEDIPPDV 263

Query: 130 RPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAKHI 2
           RPAFRH FK L++NPGQKI KK G+I+CDPL+L G++  AKH+
Sbjct: 264 RPAFRHIFKTLTKNPGQKIVKKYGVIECDPLILTGLDGTAKHM 306


>ref|XP_004162698.1| PREDICTED: DNA-directed RNA polymerase 3, chloroplastic-like
           [Cucumis sativus]
          Length = 975

 Score =  122 bits (305), Expect = 4e-26
 Identities = 54/103 (52%), Positives = 76/103 (73%)
 Frame = -2

Query: 310 NGLIKSKRXXXXXXXXXXXESSPWSRATQAKLGTRLVELLLETAYVHSPVNQSVDTPPDI 131
           NGLI+ ++           E   W R TQAKLG+RL+ELL+E+A++  PV+QS D+PPDI
Sbjct: 298 NGLIRRRKLKEVQKLLKKEEFKAWGRDTQAKLGSRLIELLIESAFIQPPVSQSADSPPDI 357

Query: 130 RPAFRHGFKPLSRNPGQKISKKCGIIQCDPLVLAGVEKCAKHI 2
           RPAF HGFKP+++ PGQ   KK G+++CDP+VLAG+++ AKH+
Sbjct: 358 RPAFWHGFKPVAKTPGQNFVKKYGVVECDPIVLAGLDRTAKHM 400