BLASTX nr result

ID: Glycyrrhiza24_contig00025845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025845
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536869.1| PREDICTED: uncharacterized protein LOC100784...   186   1e-45
ref|XP_003519746.1| PREDICTED: uncharacterized protein LOC100796...   182   2e-44
ref|XP_003591410.1| WD-40 repeat protein-like protein [Medicago ...   159   2e-37
ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248...    82   3e-14

>ref|XP_003536869.1| PREDICTED: uncharacterized protein LOC100784354 [Glycine max]
          Length = 1695

 Score =  186 bits (473), Expect = 1e-45
 Identities = 98/142 (69%), Positives = 109/142 (76%), Gaps = 3/142 (2%)
 Frame = -1

Query: 418  SGSDKCPDDSLENNEVAHSSHPRDLKMKAPMKSIKLVIKKKQLSADIGSPCKLKFGSSKA 239
            SGS+KC +DSLENNEV  SSH R+LKMKAP+KS KLVIKKKQ+S D    CKLK  SSKA
Sbjct: 1177 SGSEKCAEDSLENNEVVQSSHCRNLKMKAPVKSTKLVIKKKQISPDTEGSCKLKIVSSKA 1236

Query: 238  DSIHARGDVISGNSSFTGPNLVTEAPEGEDDRNISSPRPPSSYSDHRSYDDVHERDGSYK 59
            DS  ARG VISG+SSF GPNLVTE PEGEDDR  SSP+   SYSD RSYD VH+RD SYK
Sbjct: 1237 DSTGARGIVISGSSSFMGPNLVTEVPEGEDDRKFSSPQLLHSYSDKRSYDHVHKRDKSYK 1296

Query: 58   KEVNPDG---FGCDREGNTSIF 2
             +VN DG   F CD E +TS+F
Sbjct: 1297 GKVNQDGFESFDCDTEEHTSVF 1318


>ref|XP_003519746.1| PREDICTED: uncharacterized protein LOC100796497 [Glycine max]
          Length = 1719

 Score =  182 bits (463), Expect = 2e-44
 Identities = 97/142 (68%), Positives = 106/142 (74%), Gaps = 3/142 (2%)
 Frame = -1

Query: 418  SGSDKCPDDSLENNEVAHSSHPRDLKMKAPMKSIKLVIKKKQLSADIGSPCKLKFGSSKA 239
            SGSDKC +D+LENNEV HSSH  DLKMKAP+KS KLVIKKKQ+SAD   PCKLK  SSKA
Sbjct: 1176 SGSDKCAEDTLENNEVVHSSHCHDLKMKAPVKSTKLVIKKKQISADTEGPCKLKIVSSKA 1235

Query: 238  DSIHARGDVISGNSSFTGPNLVTEAPEGEDDRNISSPRPPSSYSDHRSYDDVHERDGSYK 59
            DS  ARG  IS NSS  GPNLVTE PEGEDDR  SSP+   SYSD RSYD  H+RD SYK
Sbjct: 1236 DSSCARGIGISENSSSMGPNLVTEVPEGEDDRKFSSPQLLHSYSDKRSYDHFHKRDKSYK 1295

Query: 58   KEVNPDG---FGCDREGNTSIF 2
             +VN DG   F CD   +TS+F
Sbjct: 1296 GKVNQDGFESFDCDMGEHTSVF 1317


>ref|XP_003591410.1| WD-40 repeat protein-like protein [Medicago truncatula]
            gi|355480458|gb|AES61661.1| WD-40 repeat protein-like
            protein [Medicago truncatula]
          Length = 1910

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/139 (57%), Positives = 101/139 (72%)
 Frame = -1

Query: 418  SGSDKCPDDSLENNEVAHSSHPRDLKMKAPMKSIKLVIKKKQLSADIGSPCKLKFGSSKA 239
            S SDKC +DS ENNEV HS+H +++KMKAP K  K++IKKKQ   DI +P KLK G  KA
Sbjct: 1373 SRSDKCTEDSQENNEVVHSNHTQEVKMKAPFKPTKIIIKKKQPPEDIANPLKLKVGIPKA 1432

Query: 238  DSIHARGDVISGNSSFTGPNLVTEAPEGEDDRNISSPRPPSSYSDHRSYDDVHERDGSYK 59
            DSI AR DV+SGN +FTGP+ +TEA EG +  + SSP+  +SY D RSY+ VHER+ S+K
Sbjct: 1433 DSIGARSDVVSGNPAFTGPDRLTEAVEGGNGTSTSSPQLLNSYFDQRSYNHVHERNKSHK 1492

Query: 58   KEVNPDGFGCDREGNTSIF 2
             E NP+GFG D   N SI+
Sbjct: 1493 SEPNPNGFGFDLGENASIY 1511


>ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248563 [Vitis vinifera]
          Length = 1766

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 54/141 (38%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
 Frame = -1

Query: 418  SGSDKCPD-DSLENNEVAHSSHPRDLKMKAPMKSIKLVIKKKQLSADIGSPCKLKFGSSK 242
            SGSD+  D DSLE +E    +H  DLK   P  S+KL I+ K++  D   P KLKF +  
Sbjct: 1219 SGSDEFRDCDSLEMDETVGINHSHDLKGNPPANSLKLRIRSKRIVRDPNFPSKLKFVTGT 1278

Query: 241  ADSIHARGDVISGNSSFTGPNLVTEAPEGEDDRNI---SSPRPPSSYSDHRSYDDVHERD 71
             +  +  GD++S + S    N ++E P  E+D+ I   SSP    S SD ++YD VH+R 
Sbjct: 1279 EEPSNIGGDLMSRSHSRMEHNQISEVP--EEDKVIEMPSSPHRSHSDSDKQNYDAVHKRA 1336

Query: 70   GSYKKEVNPDGFGCDREGNTS 8
             SY    N +G+G   E + S
Sbjct: 1337 KSYMARTNAEGYGGSMEESAS 1357


Top