BLASTX nr result

ID: Glycyrrhiza24_contig00025824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025824
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48593.1| unknown [Lotus japonicus]                               98   8e-19
ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]...    81   8e-14
gb|ABN09044.1| Ribonuclease H [Medicago truncatula]                    80   1e-13
gb|ABD33309.1| Ribonuclease H [Medicago truncatula]                    76   3e-12
ref|XP_003625075.1| TMV resistance protein N [Medicago truncatul...    76   3e-12

>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/111 (45%), Positives = 66/111 (59%)
 Frame = -2

Query: 342 FYGSIGVADNLEAELAALCFGLTIAWDEGIRRLTCYSDSQTAILLRTAPVSVTHAYVALA 163
           F+G +     L  EL  +  GL++AW++G R + C SDSQ A+ L  +  S  H Y AL 
Sbjct: 147 FFGYLDECCILHLELLGMFHGLSLAWEQGYRIVECQSDSQDAVTLVKSTPSSCHRYAALV 206

Query: 162 WTIQELLARDWEVTLLHTLREANASADVLAKMGASQRERLQIITAPSAALG 10
           W I++L +RDW V L HTLRE NA AD+L K GA Q + L I   P A LG
Sbjct: 207 WDIKDLQSRDWIVELRHTLREGNACADLLVKHGADQNDDLVITENPIAGLG 257


>ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
            gi|355495128|gb|AES76331.1| Resistance protein PRG
            [Medicago truncatula]
          Length = 1256

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 46/88 (52%), Positives = 56/88 (63%)
 Frame = -2

Query: 312  LEAELAALCFGLTIAWDEGIRRLTCYSDSQTAILLRTAPVSVTHAYVALAWTIQELLARD 133
            L AEL A+  GLT+A   GI  L C+SDSQ AI L TA +   HAY  L   I+E+LA +
Sbjct: 1142 LHAELTAIFHGLTLAASMGIEELACFSDSQIAISLITAAIPRFHAYAVLIQDIKEILASN 1201

Query: 132  WEVTLLHTLREANASADVLAKMGASQRE 49
               T+LHTLRE N  AD +AK+GAS  E
Sbjct: 1202 -NFTILHTLREGNHCADFMAKLGASSTE 1228


>gb|ABN09044.1| Ribonuclease H [Medicago truncatula]
          Length = 235

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 44/103 (42%), Positives = 59/103 (57%)
 Frame = -2

Query: 342 FYGSIGVADNLEAELAALCFGLTIAWDEGIRRLTCYSDSQTAILLRTAPVSVTHAYVALA 163
           F+G       L  E++ L  GL + WD GI+ + C+SDS T + L    ++V H Y  L 
Sbjct: 110 FFGKNSRPCILHVEISGLYHGLKLCWDIGIKHVVCHSDSTTVVDLVQKDLNVHHKYGNLI 169

Query: 162 WTIQELLARDWEVTLLHTLREANASADVLAKMGASQRERLQII 34
             I++LL RDW V+L HTL E NA+AD LAK GA     L I+
Sbjct: 170 MAIKKLLRRDWVVSLRHTLCEGNAAADFLAKKGALSDTSLVIL 212


>gb|ABD33309.1| Ribonuclease H [Medicago truncatula]
          Length = 1378

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = -2

Query: 342  FYGSIGVADNLEAELAALCFGLTIAWDEGIRRLTCYSDSQTAILLRTAPVSVTH-AYVAL 166
            FYGS+G    ++AEL A+C GL  AWD G R +   +D   AI       ++ H AY +L
Sbjct: 1215 FYGSLGFTTKMKAELYAICQGLITAWDFGYRNILVETDYLEAIK-HIEEANIEHDAYGSL 1273

Query: 165  AWTIQELLARDWEVTLLHTLREANASADVLAKMGASQRE 49
               I+ L+ R+W + L H+L+E NA AD+L+++GA Q E
Sbjct: 1274 VADIRSLMQRNWSLNLDHSLKEDNACADILSRIGAEQHE 1312


>ref|XP_003625075.1| TMV resistance protein N [Medicago truncatula]
            gi|355500090|gb|AES81293.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1579

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = -2

Query: 342  FYGSIGVADNLEAELAALCFGLTIAWDEGIRRLTCYSDSQTAILLRTAPVSVTH-AYVAL 166
            FYGS+G    ++AEL A+C GL  AWD G R +   +D   AI       ++ H AY +L
Sbjct: 1398 FYGSLGFTTKMKAELYAICQGLITAWDFGYRNILVETDYLEAIK-HIEEANIEHDAYGSL 1456

Query: 165  AWTIQELLARDWEVTLLHTLREANASADVLAKMGASQRE 49
               I+ L+ R+W + L H+L+E NA AD+L+++GA Q E
Sbjct: 1457 VADIRSLMQRNWSLNLDHSLKEDNACADILSRIGAEQHE 1495


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