BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025809
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
ref|XP_003621549.1| Pentatricopeptide repeat-containing protein ...   109   2e-22
emb|CBI16054.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  138 bits (348), Expect = 4e-31
 Identities = 75/104 (72%), Positives = 82/104 (78%), Gaps = 5/104 (4%)
 Frame = -3

Query: 299 MWVLQIPQ---QAPFQSHPFYAPHVSSRLPVSFVSLNPSSS--NPIKDNKSNNQLIQSLC 135
           MWVLQIPQ    AP QSH  Y  HVSSR+PVSFVSLNPS++  N IK N  NNQLIQSLC
Sbjct: 1   MWVLQIPQIVRHAPSQSHLCYNSHVSSRVPVSFVSLNPSANLMNDIKGN--NNQLIQSLC 58

Query: 134 RRGNLKQALQVLCSEPNPTQKAFELLIYYCAQQNSLSDGLDVHR 3
           + GNLKQA+ +LC EPNPTQ+ FE LI  CAQQNSLSDGLDVHR
Sbjct: 59  KGGNLKQAIHLLCCEPNPTQRTFEHLICSCAQQNSLSDGLDVHR 102


>ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  137 bits (345), Expect = 9e-31
 Identities = 74/103 (71%), Positives = 81/103 (78%), Gaps = 4/103 (3%)
 Frame = -3

Query: 299 MWVLQIPQ---QAPFQSHPFYAPHVSSRLPVSFVSLNPSSSNPIKD-NKSNNQLIQSLCR 132
           MWVLQIPQ     P QSH  Y  HVSSR+PVSFVSLNP S+N I D N +NNQLIQSLC+
Sbjct: 1   MWVLQIPQFVRHVPSQSHLCYTSHVSSRVPVSFVSLNP-SANLINDINSNNNQLIQSLCK 59

Query: 131 RGNLKQALQVLCSEPNPTQKAFELLIYYCAQQNSLSDGLDVHR 3
            GNLKQAL +LC EPNPTQ+ FE LIY CAQ+NSLS GLDVHR
Sbjct: 60  GGNLKQALHLLCCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHR 102


>ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87241485|gb|ABD33343.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355496564|gb|AES77767.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  109 bits (273), Expect = 2e-22
 Identities = 65/104 (62%), Positives = 75/104 (72%), Gaps = 6/104 (5%)
 Frame = -3

Query: 299 MWVLQIPQ---QAPFQSHPF-YAPHVSSRLPVSFVSLNPSSSNPIKDNKSNNQ--LIQSL 138
           M VLQ+PQ     PFQ++P  Y+ HVS      FVSLN +S  P KD KSNN   LIQSL
Sbjct: 1   MKVLQLPQLVRHGPFQNYPCRYSSHVS------FVSLN-ASGYPTKDIKSNNNDDLIQSL 53

Query: 137 CRRGNLKQALQVLCSEPNPTQKAFELLIYYCAQQNSLSDGLDVH 6
           CR GNLKQA+Q+LC EPNPT+K FELLI  C +QNSLSDG+DVH
Sbjct: 54  CRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVH 97


>emb|CBI16054.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299 MWVLQIPQ--QAPFQSHPFYAPHVSSRLPVSFVSLNPSSSNPIK-DNKSNNQLIQSLCRR 129
           MW  Q PQ  Q P    PF+ P   S  P   ++L PS++     D+ +NN LIQSLC++
Sbjct: 1   MWAFQTPQTIQQPHLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQ 60

Query: 128 GNLKQALQVLCSEPNPTQKAFELLIYYCAQQNSLSDGLDVHR 3
           GNL QALQVL  EPNPTQ  +ELLI  C +QNSL  G+D+HR
Sbjct: 61  GNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHR 102


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 3/102 (2%)
 Frame = -3

Query: 299 MWVLQIPQ--QAPFQSHPFYAPHVSSRLPVSFVSLNPSSSNPIK-DNKSNNQLIQSLCRR 129
           MW  Q PQ  Q P    PF+ P   S  P   ++L PS++     D+ +NN LIQSLC++
Sbjct: 1   MWAFQTPQTIQQPHLPKPFHKPTAISPKPQCCLALRPSTTTRSNGDSNNNNPLIQSLCKQ 60

Query: 128 GNLKQALQVLCSEPNPTQKAFELLIYYCAQQNSLSDGLDVHR 3
           GNL QALQVL  EPNPTQ  +ELLI  C +QNSL  G+D+HR
Sbjct: 61  GNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHR 102