BLASTX nr result

ID: Glycyrrhiza24_contig00025790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025790
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537076.1| PREDICTED: probable F-box protein At1g60180-...   221   5e-56
ref|XP_003520705.1| PREDICTED: F-box protein At3g44326-like [Gly...   216   2e-54
ref|XP_003553607.1| PREDICTED: probable F-box protein At1g60180-...   209   1e-52
ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-...   185   4e-45
ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-...   185   4e-45

>ref|XP_003537076.1| PREDICTED: probable F-box protein At1g60180-like [Glycine max]
          Length = 330

 Score =  221 bits (563), Expect = 5e-56
 Identities = 109/182 (59%), Positives = 132/182 (72%), Gaps = 16/182 (8%)
 Frame = +3

Query: 3   ILTRLDGPALASIASTCSQLHALSSNEHLWAKACNSTWPSTSAPRVQHIISTFPNGSRSF 182
           ILTRL GPALAS  +TCSQLH+LSS++ LW  AC++TWPST  PRV+H+I TFPN +RSF
Sbjct: 29  ILTRLPGPALASATATCSQLHSLSSHDPLWLNACHATWPSTLTPRVRHVIDTFPNAARSF 88

Query: 183 FADCF------XXXXXXXXXXNPDRTPELISAVDLFYGQRLVLSRVVETETVTGWFRCSP 344
           FAD F                +P+RTPELISAVDLF+ + L+ S+VVETETVTGWFRCSP
Sbjct: 89  FADSFPSSHSLSSNKTTFSSNDPNRTPELISAVDLFHNESLLFSKVVETETVTGWFRCSP 148

Query: 345 FRVDLLDPKDVVRTRVKYP----------EEVRLRWIVIDPASGRAVDVSSGNAVAVERH 494
           FR+DL+DPK  V+T VKYP          E +RL WI++DP   RAVDVSSG  VA+E+H
Sbjct: 149 FRIDLVDPKHAVKTGVKYPVDEDTCRELEESLRLTWILVDPTGKRAVDVSSGKVVALEKH 208

Query: 495 WL 500
           WL
Sbjct: 209 WL 210


>ref|XP_003520705.1| PREDICTED: F-box protein At3g44326-like [Glycine max]
          Length = 335

 Score =  216 bits (549), Expect = 2e-54
 Identities = 109/176 (61%), Positives = 133/176 (75%), Gaps = 10/176 (5%)
 Frame = +3

Query: 3   ILTRLDGPALASIASTCSQLHALSSNEHLWAKACNSTWPSTSAPRVQHIISTFPNGSRSF 182
           ILT LDG ALAS+ASTCSQLHALS +E LW   C+STWPST++PRV+H+ISTFP  SRSF
Sbjct: 34  ILTCLDGRALASVASTCSQLHALSDHEPLWENICHSTWPSTNSPRVRHVISTFPCASRSF 93

Query: 183 FADCFXXXXXXXXXXNPDRTPELISAVDLFYGQRLVLSRVVETETVTGWFRCSPFRVDLL 362
           F+D F          N DR PELISAVD+F+ +R+VLSRVVETET +GWFRCSPFR+D+L
Sbjct: 94  FSDSF-PSFAAREGSNIDRAPELISAVDIFHRRRVVLSRVVETETESGWFRCSPFRIDVL 152

Query: 363 DPKDVVRTRVKYP----------EEVRLRWIVIDPASGRAVDVSSGNAVAVERHWL 500
           D K+ V T ++YP          E++RL WIV++P   RAV+VSSG AV+VERHWL
Sbjct: 153 DQKEAVATAMEYPLSDGACEILGEDLRLSWIVVNPKGKRAVNVSSGTAVSVERHWL 208


>ref|XP_003553607.1| PREDICTED: probable F-box protein At1g60180-like [Glycine max]
          Length = 335

 Score =  209 bits (533), Expect = 1e-52
 Identities = 105/176 (59%), Positives = 129/176 (73%), Gaps = 10/176 (5%)
 Frame = +3

Query: 3   ILTRLDGPALASIASTCSQLHALSSNEHLWAKACNSTWPSTSAPRVQHIISTFPNGSRSF 182
           ILT LDGP+LAS+ASTCSQLHALS+ E LW   C+STWPSTS+PRV+H++STFP  S SF
Sbjct: 33  ILTCLDGPSLASVASTCSQLHALSAREPLWENICHSTWPSTSSPRVRHVMSTFPRASLSF 92

Query: 183 FADCFXXXXXXXXXXNPDRTPELISAVDLFYGQRLVLSRVVETETVTGWFRCSPFRVDLL 362
           F+D F          +  R PELISAVD+F+ +R VLSRVVETET + WFRCSPFR+D+L
Sbjct: 93  FSDSF-PSFAAAREGSSSRAPELISAVDIFHRRRAVLSRVVETETESDWFRCSPFRIDVL 151

Query: 363 DPKDVVRTRVKYP----------EEVRLRWIVIDPASGRAVDVSSGNAVAVERHWL 500
           D K+ V T ++YP          E++RL WIV+DP   RAV+VSSG  V+VERHWL
Sbjct: 152 DQKEAVATAMEYPRSEEACEILGEDLRLSWIVVDPNGKRAVNVSSGRVVSVERHWL 207


>ref|XP_004161239.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  185 bits (469), Expect = 4e-45
 Identities = 96/189 (50%), Positives = 122/189 (64%), Gaps = 23/189 (12%)
 Frame = +3

Query: 3   ILTRLDGPALASIASTCSQLHALSSNEHLWAKACNSTWPSTSAPRVQHIISTFPNGSRSF 182
           ILTRLDGPALAS A T S+LH L++   LW+  C+STWPST+ PR+  +IS FP+G RSF
Sbjct: 35  ILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPSTTTPRLHALISEFPDGPRSF 94

Query: 183 FADCFXXXXXXXXXXNPDRT------------PELISAVDLFYGQRLVLSRVVETETVTG 326
           F+D                T            PELISAVD++Y   ++ S+VVETETV+G
Sbjct: 95  FSDSLPRGSNHSETSTSSPTSPATYCHRRHLPPELISAVDIYYRGEMIFSKVVETETVSG 154

Query: 327 WFRCSPFRVDLLDPKDVVRTRVKYP-----------EEVRLRWIVIDPASGRAVDVSSGN 473
           WFRCSPFR+D+LDPKDVV T +K+P           E++ L WIVID A  RA+++SS  
Sbjct: 155 WFRCSPFRIDMLDPKDVVPTPIKFPIGEGNACRELGEDLTLSWIVIDGAGRRAMNLSSYR 214

Query: 474 AVAVERHWL 500
           AV VE+HWL
Sbjct: 215 AVKVEQHWL 223


>ref|XP_004149218.1| PREDICTED: probable F-box protein At1g60180-like [Cucumis sativus]
          Length = 347

 Score =  185 bits (469), Expect = 4e-45
 Identities = 96/189 (50%), Positives = 122/189 (64%), Gaps = 23/189 (12%)
 Frame = +3

Query: 3   ILTRLDGPALASIASTCSQLHALSSNEHLWAKACNSTWPSTSAPRVQHIISTFPNGSRSF 182
           ILTRLDGPALAS A T S+LH L++   LW+  C+STWPST+ PR+  +IS FP+G RSF
Sbjct: 35  ILTRLDGPALASAACTSSELHRLTAEPKLWSAICHSTWPSTTTPRLHALISEFPDGPRSF 94

Query: 183 FADCFXXXXXXXXXXNPDRT------------PELISAVDLFYGQRLVLSRVVETETVTG 326
           F+D                T            PELISAVD++Y   ++ S+VVETETV+G
Sbjct: 95  FSDSLPRGSNHSETSTSSPTSPATYCHRRHLPPELISAVDIYYRGEMIFSKVVETETVSG 154

Query: 327 WFRCSPFRVDLLDPKDVVRTRVKYP-----------EEVRLRWIVIDPASGRAVDVSSGN 473
           WFRCSPFR+D+LDPKDVV T +K+P           E++ L WIVID A  RA+++SS  
Sbjct: 155 WFRCSPFRIDMLDPKDVVPTPIKFPIGEGNACRELGEDLTLSWIVIDGAGRRAMNLSSYR 214

Query: 474 AVAVERHWL 500
           AV VE+HWL
Sbjct: 215 AVKVEQHWL 223


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