BLASTX nr result

ID: Glycyrrhiza24_contig00025769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025769
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Gl...   155   3e-36
ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Gl...   150   8e-35
ref|XP_003591894.1| Auxin response factor [Medicago truncatula] ...   147   1e-33
ref|XP_002534044.1| Auxin response factor, putative [Ricinus com...   132   4e-29
ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|2...   131   5e-29

>ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 608

 Score =  155 bits (393), Expect = 3e-36
 Identities = 77/104 (74%), Positives = 81/104 (77%), Gaps = 12/104 (11%)
 Frame = +1

Query: 10  NNQVFGGSGVFLCG------------GNENILGRVRGECVVEAVNCAVNGRPFEVVYYPR 153
           NN +FGG G FLCG            G+  I+GRV  E VVEAV CAVNGRPFEVVYYPR
Sbjct: 235 NNPLFGGGGGFLCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRPFEVVYYPR 294

Query: 154 ASTPEFCVKASAVKAAMQIQWCPGMRFKMPFETEDSSRISWFMG 285
           AS+PEFCVKAS VKAAMQIQWC GMRFKMPFETEDSSRISWFMG
Sbjct: 295 ASSPEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMG 338


>ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 589

 Score =  150 bits (380), Expect = 8e-35
 Identities = 75/101 (74%), Positives = 79/101 (78%), Gaps = 9/101 (8%)
 Frame = +1

Query: 10  NNQVFGGSGVFLCGGNENIL---------GRVRGECVVEAVNCAVNGRPFEVVYYPRAST 162
           NN +FGG   FLCG   N++         GRV  E VVEAV CAVNGRPFEVVYYPRAS+
Sbjct: 237 NNPLFGGG--FLCGSESNLMSGGDHEMLVGRVAAESVVEAVTCAVNGRPFEVVYYPRASS 294

Query: 163 PEFCVKASAVKAAMQIQWCPGMRFKMPFETEDSSRISWFMG 285
           PEFCVKAS VKAAMQIQWC GMRFKMPFETEDSSRISWFMG
Sbjct: 295 PEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMG 335


>ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
           gi|355480942|gb|AES62145.1| Auxin response factor
           [Medicago truncatula]
          Length = 619

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/101 (72%), Positives = 82/101 (81%), Gaps = 7/101 (6%)
 Frame = +1

Query: 4   NNNNQVFGGSGV-FLCG------GNENILGRVRGECVVEAVNCAVNGRPFEVVYYPRAST 162
           N  + +FGG G  FLCG      G ++++G+V  E VVEAVNCAVNGR FEVVYYPRAST
Sbjct: 239 NRVSPLFGGVGSGFLCGNDNRKNGCDDLMGKVGAESVVEAVNCAVNGRSFEVVYYPRAST 298

Query: 163 PEFCVKASAVKAAMQIQWCPGMRFKMPFETEDSSRISWFMG 285
           PEFCVK S+VK+AMQIQWC GMRFKMPFETEDSSRISWFMG
Sbjct: 299 PEFCVKVSSVKSAMQIQWCSGMRFKMPFETEDSSRISWFMG 339


>ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
           gi|223525942|gb|EEF28340.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 590

 Score =  132 bits (331), Expect = 4e-29
 Identities = 60/78 (76%), Positives = 68/78 (87%)
 Frame = +1

Query: 52  GNENILGRVRGECVVEAVNCAVNGRPFEVVYYPRASTPEFCVKASAVKAAMQIQWCPGMR 231
           GN +   +VR E V++A   A NG+PFE+VYYPRASTPEFCV+ASAV+AAMQIQWCPGMR
Sbjct: 266 GNGDNKSKVRVESVIQAATLAANGQPFEIVYYPRASTPEFCVRASAVRAAMQIQWCPGMR 325

Query: 232 FKMPFETEDSSRISWFMG 285
           FKMPFETEDSSRISWFMG
Sbjct: 326 FKMPFETEDSSRISWFMG 343


>ref|XP_002316370.1| predicted protein [Populus trichocarpa] gi|222865410|gb|EEF02541.1|
           predicted protein [Populus trichocarpa]
          Length = 669

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/78 (75%), Positives = 69/78 (88%)
 Frame = +1

Query: 52  GNENILGRVRGECVVEAVNCAVNGRPFEVVYYPRASTPEFCVKASAVKAAMQIQWCPGMR 231
           GN ++ G+V+ E V+EA + A NG+PFE VYYPRASTPEFCVKASAV++A+QIQWCPGMR
Sbjct: 251 GNGDMKGKVKAESVIEAASLAANGQPFEAVYYPRASTPEFCVKASAVRSAIQIQWCPGMR 310

Query: 232 FKMPFETEDSSRISWFMG 285
           FKM FETEDSSRISWFMG
Sbjct: 311 FKMAFETEDSSRISWFMG 328


Top