BLASTX nr result
ID: Glycyrrhiza24_contig00025732
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00025732
(1153 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003621602.1| Pentatricopeptide repeat-containing protein ... 413 e-113
ref|XP_003551785.1| PREDICTED: pentatricopeptide repeat-containi... 405 e-110
emb|CBI22283.3| unnamed protein product [Vitis vinifera] 327 3e-87
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi... 327 3e-87
ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containi... 310 3e-82
>ref|XP_003621602.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496617|gb|AES77820.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 613
Score = 413 bits (1062), Expect = e-113
Identities = 198/262 (75%), Positives = 227/262 (86%), Gaps = 1/262 (0%)
Frame = +1
Query: 1 LQNGFQPNSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGEL 180
+ NGF+PNSNILN+IICVCAKEGKWD ALSVFQ+MLTS+ KPN VACN LINSLG+ GEL
Sbjct: 352 VHNGFEPNSNILNSIICVCAKEGKWDEALSVFQKMLTSDFKPNLVACNVLINSLGKEGEL 411
Query: 181 KLAFQAYNTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIE-SQMSEFNIHLYNT 357
KLAFQ YNTMKS KPDAYT+NAL+SSLNKAN+H+E+L++F IE SQ+ EFN HLYNT
Sbjct: 412 KLAFQVYNTMKSFGQKPDAYTYNALMSSLNKANKHNEALKIFNRIERSQICEFNKHLYNT 471
Query: 358 ALTSCSKLGLWERALEIVWQMEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQK 537
AL SCS+L LW+RA+EI+W+MEAS DLTVSY+LVIR CEL +KP IAWQV EHM+HQ
Sbjct: 472 ALMSCSELRLWDRAVEILWKMEASGLSDLTVSYNLVIRTCELVKKPKIAWQVYEHMVHQN 531
Query: 538 CSPNMFTYLSIIRCCVRGDLWEELEETLNRTMPNATLYNAAVQGMCLRGKVNLAKKVYRK 717
CSPN+FTYLSIIRCC RG+L+EELEE LN+T+PNA LYNAAVQGMCLRG +NLA +VY K
Sbjct: 532 CSPNIFTYLSIIRCCTRGELYEELEEILNKTVPNAALYNAAVQGMCLRGNINLANEVYTK 591
Query: 718 MQECGLEPDAKTRVLMHPMIRK 783
M E GLEPD KTRVLMHP IRK
Sbjct: 592 MLEHGLEPDVKTRVLMHPTIRK 613
Score = 87.8 bits (216), Expect = 5e-15
Identities = 62/253 (24%), Positives = 114/253 (45%), Gaps = 9/253 (3%)
Frame = +1
Query: 22 NSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGELKLAFQAY 201
+ N+L+ I ++ K +A+ F+ M L PN+ ACN+L++ L R G F+ +
Sbjct: 182 DENVLSNRILELSRTNKIRSAMEYFRSMKMFGLCPNNHACNSLLSGLLRNGSFDDCFKVF 241
Query: 202 NTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIESQM---SEFNIHLYNTALTSC 372
+ K +T++ +L + K +++ F +E + F+ +YNT ++ C
Sbjct: 242 DFTKE-KGMTTGHTYSLILMACAKGQGCDSAVEFFRKLERECDVEKGFDAVVYNTMISIC 300
Query: 373 SKLGLWERALEIVWQMEASEQYDLT-VSYSLVIRACELARKPSIAWQVCEHMIHQKCSPN 549
++ W +E +W+ D T V+Y L+I + + ++ M+H PN
Sbjct: 301 KEVDNWSE-IERLWRSMKENGCDRTLVTYRLLISSFVRCNQSELSLYAYHEMVHNGFEPN 359
Query: 550 MFTYLSIIRCCVRGDLWEELEETLNRTM-----PNATLYNAAVQGMCLRGKVNLAKKVYR 714
SII C + W+E + + PN N + + G++ LA +VY
Sbjct: 360 SNILNSIICVCAKEGKWDEALSVFQKMLTSDFKPNLVACNVLINSLGKEGELKLAFQVYN 419
Query: 715 KMQECGLEPDAKT 753
M+ G +PDA T
Sbjct: 420 TMKSFGQKPDAYT 432
>ref|XP_003551785.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Glycine max]
Length = 749
Score = 405 bits (1040), Expect = e-110
Identities = 197/262 (75%), Positives = 227/262 (86%), Gaps = 1/262 (0%)
Frame = +1
Query: 1 LQNGFQPNSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGEL 180
+QNG++P++N LN II VCAKEGKWDAALSVF +ML ELKPN VACNALINSLGRAGEL
Sbjct: 486 VQNGYEPDNNTLNVIISVCAKEGKWDAALSVFNKMLKVELKPNLVACNALINSLGRAGEL 545
Query: 181 KLAFQAYNTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIE-SQMSEFNIHLYNT 357
K FQ YNTMKSLD KPDAYTFNALLSSLNKA+RHH++L+LFEMIE Q S+FN+HLYNT
Sbjct: 546 KQVFQVYNTMKSLDLKPDAYTFNALLSSLNKADRHHKALELFEMIERDQTSQFNVHLYNT 605
Query: 358 ALTSCSKLGLWERALEIVWQMEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQK 537
L SCSKL LW+RA+EI+WQMEAS DLT+SY+LVIR CELARKP+IA QV +HM+HQK
Sbjct: 606 VLMSCSKLRLWDRAIEILWQMEASGLSDLTMSYNLVIRTCELARKPTIALQVYKHMVHQK 665
Query: 538 CSPNMFTYLSIIRCCVRGDLWEELEETLNRTMPNATLYNAAVQGMCLRGKVNLAKKVYRK 717
CSP++FTYLS+IRCCVRGDLWEELEE LN+TMPNATLYNAAVQG+CLR ++A K+Y K
Sbjct: 666 CSPDIFTYLSVIRCCVRGDLWEELEEILNQTMPNATLYNAAVQGLCLRKNGDMANKIYTK 725
Query: 718 MQECGLEPDAKTRVLMHPMIRK 783
M E G +PD KT+VLM MIRK
Sbjct: 726 MLESGFQPDVKTQVLMLRMIRK 747
Score = 88.2 bits (217), Expect = 4e-15
Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 9/253 (3%)
Frame = +1
Query: 22 NSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGELKLAFQAY 201
+ N+L+ I V ++ K +A+ F+ M S L PN ACN+LI+SL R G + +
Sbjct: 316 DENVLSNRILVLSRTNKIRSAMEYFRSMELSGLSPNIHACNSLISSLLRNGWFDNCIKVF 375
Query: 202 NTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIESQM---SEFNIHLYNTALTSC 372
N ++ +T++ +L + KA+ +L LF +ES+ +F+ +YNT ++ C
Sbjct: 376 NFTRA-KGITTGHTYSLILMAHAKAHGCDSALGLFRELESECDVEKDFDAIVYNTMISIC 434
Query: 373 SKLGLWERALEIVWQ-MEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQKCSPN 549
+ W +E +W+ M+A+ V+Y L+I + + +A M+ P+
Sbjct: 435 RDVDNWSE-IERLWRSMKANGCAGTHVTYHLLINSFVRFDQSDLALYAYREMVQNGYEPD 493
Query: 550 MFTYLSIIRCCVRGDLWEELEETLNRTM-----PNATLYNAAVQGMCLRGKVNLAKKVYR 714
T II C + W+ N+ + PN NA + + G++ +VY
Sbjct: 494 NNTLNVIISVCAKEGKWDAALSVFNKMLKVELKPNLVACNALINSLGRAGELKQVFQVYN 553
Query: 715 KMQECGLEPDAKT 753
M+ L+PDA T
Sbjct: 554 TMKSLDLKPDAYT 566
>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 327 bits (839), Expect = 3e-87
Identities = 155/261 (59%), Positives = 200/261 (76%)
Frame = +1
Query: 1 LQNGFQPNSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGEL 180
+QNG +P + + AII CAKEGKWD ALSVFQ ML LKPN +ACNALINS+G++G +
Sbjct: 350 IQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNV 409
Query: 181 KLAFQAYNTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIESQMSEFNIHLYNTA 360
KLAF+ Y+ MKSL H PD YT+NALL +L +AN+H ++L LFE I Q S+ N+HLYNTA
Sbjct: 410 KLAFRVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFESIREQSSQVNLHLYNTA 469
Query: 361 LTSCSKLGLWERALEIVWQMEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQKC 540
L SC KLGLW RAL+++WQMEAS + SY+LVI ACE+ARKP IA QV EHM+ Q+C
Sbjct: 470 LMSCQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQC 529
Query: 541 SPNMFTYLSIIRCCVRGDLWEELEETLNRTMPNATLYNAAVQGMCLRGKVNLAKKVYRKM 720
+P+ FT+LS+IR C+ G LW E++E LNR + +LYNAA+QGMCLRGK+ AKK+Y +M
Sbjct: 530 TPDTFTHLSLIRSCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRM 589
Query: 721 QECGLEPDAKTRVLMHPMIRK 783
++ GL+PD KTR LM ++K
Sbjct: 590 RKSGLKPDGKTRALMLQNLQK 610
Score = 84.0 bits (206), Expect = 7e-14
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Frame = +1
Query: 22 NSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGELKLAFQAY 201
N IL+ I + ++ K + L +++ M S L+P+S ACN+L++ L R L A + +
Sbjct: 180 NEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVF 239
Query: 202 NTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIESQ---MSEFNIHLYNTALTSC 372
+MK+ + ++++ +L ++ + +L++F +E + +F++ Y T ++ C
Sbjct: 240 ESMKA-NESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISIC 298
Query: 373 SKLGLWERALEIVWQMEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQKCSPNM 552
K+ W + I M+ + V+Y L++ + +A MI P
Sbjct: 299 GKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGE 358
Query: 553 FTYLSIIRCCVRGDLWE----ELEETLNRTM-PNATLYNAAVQGMCLRGKVNLAKKVYRK 717
+II C + W+ + LN + PN NA + + G V LA +VY
Sbjct: 359 DAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDV 418
Query: 718 MQECGLEPDAKT 753
M+ G PD T
Sbjct: 419 MKSLGHTPDVYT 430
>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Vitis vinifera]
Length = 546
Score = 327 bits (839), Expect = 3e-87
Identities = 155/261 (59%), Positives = 200/261 (76%)
Frame = +1
Query: 1 LQNGFQPNSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGEL 180
+QNG +P + + AII CAKEGKWD ALSVFQ ML LKPN +ACNALINS+G++G +
Sbjct: 270 IQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNV 329
Query: 181 KLAFQAYNTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIESQMSEFNIHLYNTA 360
KLAF+ Y+ MKSL H PD YT+NALL +L +AN+H ++L LFE I Q S+ N+HLYNTA
Sbjct: 330 KLAFRVYDVMKSLGHTPDVYTWNALLGALYRANQHADALHLFESIREQSSQVNLHLYNTA 389
Query: 361 LTSCSKLGLWERALEIVWQMEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQKC 540
L SC KLGLW RAL+++WQMEAS + SY+LVI ACE+ARKP IA QV EHM+ Q+C
Sbjct: 390 LMSCQKLGLWNRALQLLWQMEASGLSVSSASYNLVIGACEVARKPEIALQVYEHMVQQQC 449
Query: 541 SPNMFTYLSIIRCCVRGDLWEELEETLNRTMPNATLYNAAVQGMCLRGKVNLAKKVYRKM 720
+P+ FT+LS+IR C+ G LW E++E LNR + +LYNAA+QGMCLRGK+ AKK+Y +M
Sbjct: 450 TPDTFTHLSLIRSCIWGSLWAEVKEILNRAGTDVSLYNAAIQGMCLRGKIESAKKLYMRM 509
Query: 721 QECGLEPDAKTRVLMHPMIRK 783
++ GL+PD KTR LM ++K
Sbjct: 510 RKSGLKPDGKTRALMLQNLQK 530
Score = 84.0 bits (206), Expect = 7e-14
Identities = 61/252 (24%), Positives = 115/252 (45%), Gaps = 8/252 (3%)
Frame = +1
Query: 22 NSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGELKLAFQAY 201
N IL+ I + ++ K + L +++ M S L+P+S ACN+L++ L R L A + +
Sbjct: 100 NEQILSKRILMLSRSNKVRSVLELYRTMEFSGLQPSSHACNSLLSCLLRNEMLDDALRVF 159
Query: 202 NTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIESQ---MSEFNIHLYNTALTSC 372
+MK+ + ++++ +L ++ + +L++F +E + +F++ Y T ++ C
Sbjct: 160 ESMKA-NESTTGHSYSLVLKAIANIQGYDSALKMFSKLEVECKVKKDFDVIAYTTMISIC 218
Query: 373 SKLGLWERALEIVWQMEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQKCSPNM 552
K+ W + I M+ + V+Y L++ + +A MI P
Sbjct: 219 GKVNNWAQTERIWRSMKENGLVGTIVTYRLLVSVFVRCGQNELAIDAYSEMIQNGLKPGE 278
Query: 553 FTYLSIIRCCVRGDLWE----ELEETLNRTM-PNATLYNAAVQGMCLRGKVNLAKKVYRK 717
+II C + W+ + LN + PN NA + + G V LA +VY
Sbjct: 279 DAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPNLIACNALINSIGKSGNVKLAFRVYDV 338
Query: 718 MQECGLEPDAKT 753
M+ G PD T
Sbjct: 339 MKSLGHTPDVYT 350
>ref|XP_004169658.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29290-like
[Cucumis sativus]
Length = 600
Score = 310 bits (795), Expect = 3e-82
Identities = 145/255 (56%), Positives = 195/255 (76%)
Frame = +1
Query: 1 LQNGFQPNSNILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGEL 180
+QN F+P ++ + AII +KEGKWD AL VFQ ML L+PNSV+ NALIN+LG+A E+
Sbjct: 317 VQNSFKPGNDTMQAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEV 376
Query: 181 KLAFQAYNTMKSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIESQMSEFNIHLYNTA 360
LAF YN MKS+ H PD YT+NALL +L KANR+ +++ LFE ++ + + NIH+YNT
Sbjct: 377 TLAFSVYNVMKSMGHSPDVYTWNALLGALYKANRYSDAIHLFEFVKREKVQLNIHIYNTI 436
Query: 361 LTSCSKLGLWERALEIVWQMEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQKC 540
L SCSKLGLWERA++I+W+ME S T SY++V+ ACE+ARKP IA QV E M+HQK
Sbjct: 437 LMSCSKLGLWERAVQILWEMEVSGLSISTSSYNIVMTACEMARKPEIALQVYERMVHQKL 496
Query: 541 SPNMFTYLSIIRCCVRGDLWEELEETLNRTMPNATLYNAAVQGMCLRGKVNLAKKVYRKM 720
+P+ FT+LS+IRCC+ G LW+E+E LN++ P+ ++YN +QGMCLRGK +LAKK+Y KM
Sbjct: 497 TPDTFTHLSLIRCCIWGSLWDEVELLLNKSAPDVSVYNVVIQGMCLRGKSDLAKKLYTKM 556
Query: 721 QECGLEPDAKTRVLM 765
+E G++PD KTR LM
Sbjct: 557 RENGIQPDGKTRALM 571
Score = 68.9 bits (167), Expect = 2e-09
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 8/249 (3%)
Frame = +1
Query: 31 ILNAIICVCAKEGKWDAALSVFQRMLTSELKPNSVACNALINSLGRAGELKLAFQAYNTM 210
+L+ I + +++ K +AL + + M + L P+ A N+L+ L R + + M
Sbjct: 151 MLSKRILILSRKNKVRSALELLRSMQLAGLLPSLHALNSLLACLLRNELFADGLRIFEFM 210
Query: 211 KSLDHKPDAYTFNALLSSLNKANRHHESLQLFEMIESQ--MSEFNIHLYNTALTSCSKLG 384
K L+ +T++ +L ++ A+ +L++F+ E Q +++F+ +YNT ++ C K
Sbjct: 211 K-LNELSTGHTYSLVLKAVANAHGFLSALEMFKAWEHQCVLAQFDAIVYNTMISICGKDN 269
Query: 385 LWERALEIVWQ-MEASEQYDLTVSYSLVIRACELARKPSIAWQVCEHMIHQKCSPNMFTY 561
W A E W+ ME + ++YSL++ + +A M+ P T
Sbjct: 270 NWVEA-ERTWRLMEKNGCGATRITYSLLVSTFVRCNQNELAIDTYVKMVQNSFKPGNDTM 328
Query: 562 LSIIRCCVRGDLWEELEETLNRTM-----PNATLYNAAVQGMCLRGKVNLAKKVYRKMQE 726
+II + W+ + PN+ +NA + + +V LA VY M+
Sbjct: 329 QAIIGASSKEGKWDFALRVFQDMLKCGLQPNSVSFNALINALGKAKEVTLAFSVYNVMKS 388
Query: 727 CGLEPDAKT 753
G PD T
Sbjct: 389 MGHSPDVYT 397