BLASTX nr result

ID: Glycyrrhiza24_contig00025723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025723
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    83   2e-14
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    80   2e-13
ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Sela...    80   2e-13
ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Sela...    79   3e-13
gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]                78   6e-13

>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/80 (43%), Positives = 48/80 (60%)
 Frame = -1

Query: 306 LANASSITMYRLGGCGGETRTYSRCGCSNLLYMGGYQFRYTGQSARMYNTGNCLGGSVFT 127
           + N S+ T++   GC      YS+CGCS +   GGY F YTGQ+A +YN   C G +   
Sbjct: 23  MVNGSAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTR 82

Query: 126 FNGNSRQCSGVGWKSMFIQC 67
           F  ++R C+  GWKS+FIQC
Sbjct: 83  FGSSARACNPFGWKSIFIQC 102


>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 34/76 (44%), Positives = 46/76 (60%)
 Frame = -1

Query: 294 SSITMYRLGGCGGETRTYSRCGCSNLLYMGGYQFRYTGQSARMYNTGNCLGGSVFTFNGN 115
           S+ T++   GC      YS+CGCS +   GGY F YTGQ+A +YN   C G +   F  +
Sbjct: 1   SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSS 60

Query: 114 SRQCSGVGWKSMFIQC 67
           +R C+  GWKS+FIQC
Sbjct: 61  ARACNPFGWKSIFIQC 76


>ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Selaginella moellendorffii]
           gi|300150409|gb|EFJ17060.1| hypothetical protein
           SELMODRAFT_115352 [Selaginella moellendorffii]
          Length = 84

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = -1

Query: 303 ANASSITMYRLGGCGGETRTYSRCGCSNL--LYMGGYQFRYTGQSARMYNTGNCLGGSVF 130
           ANAS    +   GC      YS CGC+N+     GGY F Y GQ+A  YNT NC G +  
Sbjct: 4   ANASYFDAWAGPGCNNRLERYSACGCTNVGASQHGGYSFAYQGQTAAAYNTANCQGVAHT 63

Query: 129 TFNGNSRQCSGVGWKSMFIQC 67
            F+G+ + CSG GW S FIQC
Sbjct: 64  RFSGSVQDCSGFGWNSFFIQC 84


>ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Selaginella moellendorffii]
           gi|300150408|gb|EFJ17059.1| hypothetical protein
           SELMODRAFT_421332 [Selaginella moellendorffii]
          Length = 101

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/81 (46%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
 Frame = -1

Query: 303 ANASSITMYRLGGCGGETRTYSRCGCSNL--LYMGGYQFRYTGQSARMYNTGNCLGGSVF 130
           ANAS    +   GC      YS CGC+N+     GGY F Y GQ+A  YNT NC G +  
Sbjct: 21  ANASYFDTWAGPGCNNRLERYSACGCTNVGASQHGGYSFGYQGQTAAAYNTANCQGVAHT 80

Query: 129 TFNGNSRQCSGVGWKSMFIQC 67
            F+G+ + CSG GW S FIQC
Sbjct: 81  RFSGSVQDCSGFGWNSFFIQC 101


>gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]
          Length = 105

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
 Frame = -1

Query: 303 ANASSITMYRLGGCGGETRTYSRCGCSNLL--YMGGYQFRYTGQSARMYNTGNCLGGSVF 130
           +  S  T +   GC      YS+CGCSN+     GGY+F Y GQ+A  YNT NC G +  
Sbjct: 24  SEGSYFTAWAGPGCNNHAARYSKCGCSNIGNDVHGGYEFVYQGQTASAYNTANCKGVAQT 83

Query: 129 TFNGNSRQ-CSGVGWKSMFIQC 67
            F+G+  Q CSG GWKS FIQC
Sbjct: 84  RFSGSVNQACSGFGWKSFFIQC 105


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