BLASTX nr result

ID: Glycyrrhiza24_contig00025714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025714
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...   127   7e-28
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     115   4e-24
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                      115   4e-24
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                     115   4e-24
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                     115   4e-24

>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
           polyprotein from Arabidopsis arenosa [Arabidopsis
           thaliana]
          Length = 1194

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/121 (50%), Positives = 84/121 (69%), Gaps = 8/121 (6%)
 Frame = +2

Query: 5   VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178
           VSVEFFP HF+VK L+TG  LLQG+T+D++Y+ P++PP PS +   + P  +L  WH RL
Sbjct: 369 VSVEFFPAHFQVKDLKTGVQLLQGRTKDELYEWPVNPPKPSSHFTTTTPKTDLTSWHSRL 428

Query: 179 GHPHLQVLKRVIPSGSFPAS------FSCPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340
           GHP L  LK V+   S P S      F+C DCL +K+HKLPF  +T++ST+PLE ++ D+
Sbjct: 429 GHPSLSTLKVVVSQFSLPVSNSLQKQFNCSDCLLNKTHKLPFHTNTITSTQPLEYLYIDL 488

Query: 341 W 343
           W
Sbjct: 489 W 489


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 8/121 (6%)
 Frame = +2

Query: 5   VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178
           VSVEFFP HF+VK L TGA LLQGKT++++Y+ P++    +       P  +L  WH RL
Sbjct: 414 VSVEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARL 473

Query: 179 GHPHLQVLKRVIPSGSFPASFS------CPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340
           GHP L +LK +I   S P S S      C DC  +KSHKLPF+ +T++S+ PLE +++DV
Sbjct: 474 GHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDV 533

Query: 341 W 343
           W
Sbjct: 534 W 534


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 8/121 (6%)
 Frame = +2

Query: 5   VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178
           VSVEFFP HF+VK L TGA LLQGKT++++Y+ P++    +       P  +L  WH RL
Sbjct: 414 VSVEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARL 473

Query: 179 GHPHLQVLKRVIPSGSFPASFS------CPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340
           GHP L +LK +I   S P S S      C DC  +KSHKLPF+ +T++S+ PLE +++DV
Sbjct: 474 GHPSLPILKTLISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDV 533

Query: 341 W 343
           W
Sbjct: 534 W 534


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 8/121 (6%)
 Frame = +2

Query: 5   VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178
           VSVEFFP HF+VK L TGA LLQGKT++++Y+ P++    +       P  +L  WH RL
Sbjct: 414 VSVEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARL 473

Query: 179 GHPHLQVLKRVIPSGSFPASFS------CPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340
           GHP L +LK +I   S P S S      C DC  +KSHKLPF+ +T++S+ PLE +++DV
Sbjct: 474 GHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDV 533

Query: 341 W 343
           W
Sbjct: 534 W 534


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 8/121 (6%)
 Frame = +2

Query: 5   VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178
           VSVEFFP HF+VK L TGA LLQGKT++++Y+ P++    +       P  +L  WH RL
Sbjct: 414 VSVEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARL 473

Query: 179 GHPHLQVLKRVIPSGSFPASFS------CPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340
           GHP L +LK +I   S P S S      C DC  +KSHKLPF+ +T++S+ PLE +++DV
Sbjct: 474 GHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDV 533

Query: 341 W 343
           W
Sbjct: 534 W 534


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