BLASTX nr result
ID: Glycyrrhiza24_contig00025714
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00025714 (345 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr... 127 7e-28 gb|AAC02666.1| polyprotein [Arabidopsis thaliana] 115 4e-24 gb|AAC02672.1| polyprotein [Arabidopsis arenosa] 115 4e-24 gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 115 4e-24 gb|AAC02669.1| polyprotein [Arabidopsis thaliana] 115 4e-24 >gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon polyprotein from Arabidopsis arenosa [Arabidopsis thaliana] Length = 1194 Score = 127 bits (320), Expect = 7e-28 Identities = 61/121 (50%), Positives = 84/121 (69%), Gaps = 8/121 (6%) Frame = +2 Query: 5 VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178 VSVEFFP HF+VK L+TG LLQG+T+D++Y+ P++PP PS + + P +L WH RL Sbjct: 369 VSVEFFPAHFQVKDLKTGVQLLQGRTKDELYEWPVNPPKPSSHFTTTTPKTDLTSWHSRL 428 Query: 179 GHPHLQVLKRVIPSGSFPAS------FSCPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340 GHP L LK V+ S P S F+C DCL +K+HKLPF +T++ST+PLE ++ D+ Sbjct: 429 GHPSLSTLKVVVSQFSLPVSNSLQKQFNCSDCLLNKTHKLPFHTNTITSTQPLEYLYIDL 488 Query: 341 W 343 W Sbjct: 489 W 489 >gb|AAC02666.1| polyprotein [Arabidopsis thaliana] Length = 1451 Score = 115 bits (288), Expect = 4e-24 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 8/121 (6%) Frame = +2 Query: 5 VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178 VSVEFFP HF+VK L TGA LLQGKT++++Y+ P++ + P +L WH RL Sbjct: 414 VSVEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARL 473 Query: 179 GHPHLQVLKRVIPSGSFPASFS------CPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340 GHP L +LK +I S P S S C DC +KSHKLPF+ +T++S+ PLE +++DV Sbjct: 474 GHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDV 533 Query: 341 W 343 W Sbjct: 534 W 534 >gb|AAC02672.1| polyprotein [Arabidopsis arenosa] Length = 1390 Score = 115 bits (288), Expect = 4e-24 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 8/121 (6%) Frame = +2 Query: 5 VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178 VSVEFFP HF+VK L TGA LLQGKT++++Y+ P++ + P +L WH RL Sbjct: 414 VSVEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARL 473 Query: 179 GHPHLQVLKRVIPSGSFPASFS------CPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340 GHP L +LK +I S P S S C DC +KSHKLPF+ +T++S+ PLE +++DV Sbjct: 474 GHPSLPILKTLISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDV 533 Query: 341 W 343 W Sbjct: 534 W 534 >gb|AAC02664.1| polyprotein [Arabidopsis thaliana] Length = 1451 Score = 115 bits (288), Expect = 4e-24 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 8/121 (6%) Frame = +2 Query: 5 VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178 VSVEFFP HF+VK L TGA LLQGKT++++Y+ P++ + P +L WH RL Sbjct: 414 VSVEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARL 473 Query: 179 GHPHLQVLKRVIPSGSFPASFS------CPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340 GHP L +LK +I S P S S C DC +KSHKLPF+ +T++S+ PLE +++DV Sbjct: 474 GHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDV 533 Query: 341 W 343 W Sbjct: 534 W 534 >gb|AAC02669.1| polyprotein [Arabidopsis thaliana] Length = 1451 Score = 115 bits (288), Expect = 4e-24 Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 8/121 (6%) Frame = +2 Query: 5 VSVEFFPWHFEVKSLRTGAVLLQGKTEDQVYKLPLSPPFPSLNHVHSHPSINL--WHHRL 178 VSVEFFP HF+VK L TGA LLQGKT++++Y+ P++ + P +L WH RL Sbjct: 414 VSVEFFPAHFQVKDLSTGARLLQGKTKNELYEWPVNSSIATSMFASPTPKTDLPSWHARL 473 Query: 179 GHPHLQVLKRVIPSGSFPASFS------CPDCLASKSHKLPFFKSTLSSTKPLEIIFSDV 340 GHP L +LK +I S P S S C DC +KSHKLPF+ +T++S+ PLE +++DV Sbjct: 474 GHPSLPILKALISKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDV 533 Query: 341 W 343 W Sbjct: 534 W 534