BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025706
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...   172   3e-41
ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containi...   165   4e-39
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]   148   5e-34
ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32

>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355501307|gb|AES82510.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/93 (89%), Positives = 87/93 (93%)
 Frame = +3

Query: 3   LGVFGVGTSLALGKQIHSLIIKKNFSENPFVGNGLINMYSKCGDLYDSLQVFHQMTQKNS 182
           LGVFGVGT LALGKQIHSLIIKKNF ENPFVGNGL+NMYSKCGDL DSL VF+QMTQKNS
Sbjct: 359 LGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNS 418

Query: 183 VSWNSMIAAFARHGSGFRALQFYEEMRAEGVAP 281
           VSWNS+IAAFARHG GF+ALQFYEEMR EGVAP
Sbjct: 419 VSWNSVIAAFARHGDGFKALQFYEEMRVEGVAP 451



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
 Frame = +3

Query: 3   LGVFGVGTSLALGKQIHSLIIKK----NFSENP----FVGNGLINMYSKCGDLYDSLQVF 158
           L + G   +L LG  IH+ IIK+    +F  +     F+ N L++MYSKCG+  ++  VF
Sbjct: 41  LTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNVF 100

Query: 159 HQMTQKNSVSWNSMIAAFARHGSGFRALQFYEEM 260
             M  +++VSWN+MI+ F R+G    + +F+++M
Sbjct: 101 DYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQM 134


>ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Glycine max]
          Length = 753

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/92 (84%), Positives = 86/92 (93%)
 Frame = +3

Query: 3   LGVFGVGTSLALGKQIHSLIIKKNFSENPFVGNGLINMYSKCGDLYDSLQVFHQMTQKNS 182
           LGVFGVGTSL LGKQIHSLIIKKNF +N FV NGLINMYSKCGDLYDSLQVFH+MTQKNS
Sbjct: 197 LGVFGVGTSLTLGKQIHSLIIKKNFIQNLFVSNGLINMYSKCGDLYDSLQVFHEMTQKNS 256

Query: 183 VSWNSMIAAFARHGSGFRALQFYEEMRAEGVA 278
           VSWNS+IAA+AR+G GFRALQFY++MR EG+A
Sbjct: 257 VSWNSVIAAYARYGDGFRALQFYDDMRVEGIA 288


>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/93 (78%), Positives = 80/93 (86%)
 Frame = +3

Query: 3   LGVFGVGTSLALGKQIHSLIIKKNFSENPFVGNGLINMYSKCGDLYDSLQVFHQMTQKNS 182
           LGVFG+ TSLALGKQIHSLIIKK+F  N FV NGLINMYSKCGDL DS+++F  M Q+NS
Sbjct: 365 LGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNS 424

Query: 183 VSWNSMIAAFARHGSGFRALQFYEEMRAEGVAP 281
           VSWNSMIAAFARHG+G RALQ YEEMR EGV P
Sbjct: 425 VSWNSMIAAFARHGNGSRALQLYEEMRLEGVWP 457



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 14/89 (15%)
 Frame = +3

Query: 30  LALGKQIHSLIIKK----------NFSENPFVGNGLINMYSKCGDLYDSLQVFHQMTQKN 179
           L LG  +H+ IIK           N      V N L++MYS+CG+L D+ +VF  M  K+
Sbjct: 60  LHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELRDATKVFDHMPMKD 119

Query: 180 SVSWNSMIAAFARHGS---GFRAL-QFYE 254
           ++SWNS I+    +G    GFR   Q YE
Sbjct: 120 TISWNSRISGLLGNGDIEMGFRVFKQLYE 148


>emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/93 (78%), Positives = 80/93 (86%)
 Frame = +3

Query: 3   LGVFGVGTSLALGKQIHSLIIKKNFSENPFVGNGLINMYSKCGDLYDSLQVFHQMTQKNS 182
           LGVFG+ TSLALGKQIHSLIIKK+F  N FV NGLINMYSKCGDL DS+++F  M Q+NS
Sbjct: 251 LGVFGIDTSLALGKQIHSLIIKKSFGSNYFVNNGLINMYSKCGDLDDSIKIFCWMPQRNS 310

Query: 183 VSWNSMIAAFARHGSGFRALQFYEEMRAEGVAP 281
           VSWNSMIAAFARHG+G RALQ YEEMR EGV P
Sbjct: 311 VSWNSMIAAFARHGNGSRALQLYEEMRLEGVWP 343


>ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|222857914|gb|EEE95461.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  143 bits (360), Expect = 2e-32
 Identities = 69/93 (74%), Positives = 77/93 (82%)
 Frame = +3

Query: 3   LGVFGVGTSLALGKQIHSLIIKKNFSENPFVGNGLINMYSKCGDLYDSLQVFHQMTQKNS 182
           LGVFG  TSL LG+QIHSL+IK++F  NPFVGNGLINMYSKCGDL DS +VF +M   NS
Sbjct: 268 LGVFGADTSLGLGQQIHSLVIKRSFGSNPFVGNGLINMYSKCGDLEDSTKVFSRMPCMNS 327

Query: 183 VSWNSMIAAFARHGSGFRALQFYEEMRAEGVAP 281
           VSWNSMIAAFARHG G RALQ Y+EMR +GV P
Sbjct: 328 VSWNSMIAAFARHGDGSRALQLYKEMRLKGVEP 360



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/82 (36%), Positives = 47/82 (57%)
 Frame = +3

Query: 27  SLALGKQIHSLIIKKNFSENPFVGNGLINMYSKCGDLYDSLQVFHQMTQKNSVSWNSMIA 206
           +L  G QIH  + K     +  V + L++MYSKCG + D+LQ+F    Q + VS   ++A
Sbjct: 175 ALREGCQIHGRVWKLGLQSDFCVESALMDMYSKCGSMGDTLQIFESAGQLDKVSMTIILA 234

Query: 207 AFARHGSGFRALQFYEEMRAEG 272
            FA++G    A+QF+ +M   G
Sbjct: 235 GFAQNGFEEEAMQFFVKMLEAG 256