BLASTX nr result

ID: Glycyrrhiza24_contig00025685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025685
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538290.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   197   7e-49
ref|XP_003517931.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-...   193   1e-47
ref|XP_003622604.1| E3 ubiquitin-protein ligase BRE1-like protei...   192   2e-47
gb|AFK44849.1| unknown [Lotus japonicus]                              176   2e-42
ref|XP_002302510.1| histone ubiquitination proteins group [Popul...   138   4e-31

>ref|XP_003538290.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Glycine
           max]
          Length = 873

 Score =  197 bits (501), Expect = 7e-49
 Identities = 101/125 (80%), Positives = 114/125 (91%)
 Frame = +1

Query: 1   LQYQNQKLTQKLETQKLEHAAVENKFSQLKERQQSYDSTLAVAKKSWEQLVNDLESCSEQ 180
           LQYQNQKLTQKLETQKLE+A +EN+FS LKE Q+SYDSTLAV KKSWEQLV+DLE CSE+
Sbjct: 39  LQYQNQKLTQKLETQKLEYAGLENRFSLLKESQKSYDSTLAVVKKSWEQLVDDLELCSER 98

Query: 181 TREASRKSDSRFASIMDDGSSSTVQDVFLSRLLQTGATESSSTNHFANEMEEHGEITTEK 360
           TRE+SRK +SRFASIM+DGS STVQDVFLSRL+QT ATE +ST +FAN+MEEH EITTEK
Sbjct: 99  TRESSRKINSRFASIMEDGSPSTVQDVFLSRLMQTDATECASTYNFANQMEEHREITTEK 158

Query: 361 AKSIL 375
           AKSIL
Sbjct: 159 AKSIL 163


>ref|XP_003517931.1| PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1-like [Glycine
           max]
          Length = 874

 Score =  193 bits (491), Expect = 1e-47
 Identities = 98/125 (78%), Positives = 113/125 (90%)
 Frame = +1

Query: 1   LQYQNQKLTQKLETQKLEHAAVENKFSQLKERQQSYDSTLAVAKKSWEQLVNDLESCSEQ 180
           LQYQNQKLTQKLETQKLE+A +EN+FS LKERQ+SYDSTL V KKSWEQLV+DLE CSE+
Sbjct: 39  LQYQNQKLTQKLETQKLEYAGLENRFSHLKERQKSYDSTLEVVKKSWEQLVDDLELCSER 98

Query: 181 TREASRKSDSRFASIMDDGSSSTVQDVFLSRLLQTGATESSSTNHFANEMEEHGEITTEK 360
           TRE+S K++SRFASIM+DGS STVQDVFLSRL+QT ATE +S+ +FAN+MEEH EIT EK
Sbjct: 99  TRESSSKTNSRFASIMEDGSPSTVQDVFLSRLMQTDATECASSYNFANQMEEHREITIEK 158

Query: 361 AKSIL 375
           AKSIL
Sbjct: 159 AKSIL 163


>ref|XP_003622604.1| E3 ubiquitin-protein ligase BRE1-like protein [Medicago truncatula]
           gi|355497619|gb|AES78822.1| E3 ubiquitin-protein ligase
           BRE1-like protein [Medicago truncatula]
          Length = 947

 Score =  192 bits (488), Expect = 2e-47
 Identities = 107/150 (71%), Positives = 113/150 (75%), Gaps = 25/150 (16%)
 Frame = +1

Query: 1   LQYQNQKLTQKLETQKLEHAAVENKFSQLKERQQSYDSTLAVAKKSWEQLVNDLESCSEQ 180
           LQYQNQKLTQKLETQKLE+AA+ENKFSQLKE+QQSYDSTLAV KKSWEQLVNDLESCSE 
Sbjct: 42  LQYQNQKLTQKLETQKLEYAALENKFSQLKEKQQSYDSTLAVVKKSWEQLVNDLESCSEH 101

Query: 181 TREASRKSDSRFASIMDD-------------------------GSSSTVQDVFLSRLLQT 285
            RE+S K DSRFAS  D                          GSSSTVQDVFLSRLLQT
Sbjct: 102 IRESSSKVDSRFASSTDGTLFASEFICQNYFTEISVLGVDYPYGSSSTVQDVFLSRLLQT 161

Query: 286 GATESSSTNHFANEMEEHGEITTEKAKSIL 375
           GATESSS+ HFANE E+H EIT EKAKSIL
Sbjct: 162 GATESSSSYHFANETEQHREITAEKAKSIL 191


>gb|AFK44849.1| unknown [Lotus japonicus]
          Length = 163

 Score =  176 bits (446), Expect = 2e-42
 Identities = 92/118 (77%), Positives = 102/118 (86%)
 Frame = +1

Query: 1   LQYQNQKLTQKLETQKLEHAAVENKFSQLKERQQSYDSTLAVAKKSWEQLVNDLESCSEQ 180
           LQYQNQKL QKLETQKLE+AA+ENK SQL E Q SYDS L V KKSWEQ+VNDLES SE 
Sbjct: 46  LQYQNQKLLQKLETQKLEYAALENKLSQLNESQHSYDSALTVVKKSWEQMVNDLESSSEG 105

Query: 181 TREASRKSDSRFASIMDDGSSSTVQDVFLSRLLQTGATESSSTNHFANEMEEHGEITT 354
           TRE+S KSDSRFAS+M+D SSSTVQDVFLSRL+QTGATESSST  FAN+MEE  ++TT
Sbjct: 106 TRESSCKSDSRFASVMNDCSSSTVQDVFLSRLMQTGATESSSTYRFANQMEEIIKVTT 163


>ref|XP_002302510.1| histone ubiquitination proteins group [Populus trichocarpa]
           gi|222844236|gb|EEE81783.1| histone ubiquitination
           proteins group [Populus trichocarpa]
          Length = 877

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/125 (56%), Positives = 92/125 (73%)
 Frame = +1

Query: 1   LQYQNQKLTQKLETQKLEHAAVENKFSQLKERQQSYDSTLAVAKKSWEQLVNDLESCSEQ 180
           LQYQNQKL QKLE QK+EH A+ N+FSQLKE+QQ Y+STL    KSWE LV+DLE+CS +
Sbjct: 36  LQYQNQKLQQKLEAQKVEHFALGNRFSQLKEKQQPYNSTLNAVNKSWEVLVSDLETCSNR 95

Query: 181 TREASRKSDSRFASIMDDGSSSTVQDVFLSRLLQTGATESSSTNHFANEMEEHGEITTEK 360
           TRE S   D +   +  D SSS ++D FLSRL++TGATESSS+N+  ++ME   E   EK
Sbjct: 96  TREWSNGQDVKHIPVTKDESSSFLKDAFLSRLMETGATESSSSNNCPDQMEVDIETAFEK 155

Query: 361 AKSIL 375
            K+++
Sbjct: 156 NKNVV 160


Top