BLASTX nr result

ID: Glycyrrhiza24_contig00025681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025681
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40144.1| unknown [Lotus japonicus]                              242   3e-62
ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [M...   235   3e-61
ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex...   238   3e-61
gb|ACU16394.1| unknown [Glycine max]                                  234   6e-60
ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex...   227   1e-57

>gb|AFK40144.1| unknown [Lotus japonicus]
          Length = 324

 Score =  242 bits (617), Expect = 3e-62
 Identities = 123/143 (86%), Positives = 128/143 (89%)
 Frame = -2

Query: 431 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 252
           MILLQSHSRFLLQ+LLNR QN+EKGVELDHHWVEFDDVRYHIQVSMKNPHI         
Sbjct: 1   MILLQSHSRFLLQTLLNRAQNIEKGVELDHHWVEFDDVRYHIQVSMKNPHILLLSVSLPT 60

Query: 251 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 72
             SETIFV GLPFGAIEAIKA YGG+VQILDPP+DGFNLTLKINLSKIPANQE RH+FLV
Sbjct: 61  PSSETIFVCGLPFGAIEAIKATYGGIVQILDPPKDGFNLTLKINLSKIPANQEQRHAFLV 120

Query: 71  KVASVREVVLGAPLRVILKHLAS 3
           KVASVREVVLGAPLRVILKHLAS
Sbjct: 121 KVASVREVVLGAPLRVILKHLAS 143


>ref|XP_003628965.1| Actin-related protein 2/3 complex subunit [Medicago truncatula]
           gi|355522987|gb|AET03441.1| Actin-related protein 2/3
           complex subunit [Medicago truncatula]
          Length = 375

 Score =  235 bits (599), Expect(2) = 3e-61
 Identities = 121/143 (84%), Positives = 127/143 (88%)
 Frame = -2

Query: 431 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 252
           MILLQSHSRFLLQ+LLNR+QN+EKGVELDHHWVEFDDVRYHIQVSMKNP+I         
Sbjct: 52  MILLQSHSRFLLQTLLNRLQNIEKGVELDHHWVEFDDVRYHIQVSMKNPNIFLLSVSLPT 111

Query: 251 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 72
             SETIFV GLPFGAIEAIKAAYG LVQILDPPRDGFNLTLKINLSK+PANQE R + LV
Sbjct: 112 PSSETIFVCGLPFGAIEAIKAAYGSLVQILDPPRDGFNLTLKINLSKVPANQEQRQALLV 171

Query: 71  KVASVREVVLGAPLRVILKHLAS 3
           KVASVREVVLGAPLRVILKHLAS
Sbjct: 172 KVASVREVVLGAPLRVILKHLAS 194



 Score = 25.8 bits (55), Expect(2) = 3e-61
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -3

Query: 514 KKRIALDLKPSINQY-HQHHH 455
           KKRI LDL    N + H HHH
Sbjct: 7   KKRIGLDLSECNNTHNHNHHH 27


>ref|XP_003531940.1| PREDICTED: actin-related protein 2/3 complex subunit 2-like
           [Glycine max]
          Length = 324

 Score =  238 bits (608), Expect = 3e-61
 Identities = 120/143 (83%), Positives = 128/143 (89%)
 Frame = -2

Query: 431 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 252
           MILLQSHSRFLLQ+LLNR QNLEKGVELDHHWVEFDDVRYHIQVSMKNPH+         
Sbjct: 1   MILLQSHSRFLLQTLLNRAQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPT 60

Query: 251 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 72
             SETIFV GLPFGAIEAIKAAYG LVQILDPPRDGFNLTLKINLSK+PANQE +H+FLV
Sbjct: 61  PSSETIFVCGLPFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAFLV 120

Query: 71  KVASVREVVLGAPLRVILKHLAS 3
           KVAS+REVVLGAPLRVIL+HLA+
Sbjct: 121 KVASIREVVLGAPLRVILEHLAA 143


>gb|ACU16394.1| unknown [Glycine max]
          Length = 194

 Score =  234 bits (597), Expect = 6e-60
 Identities = 118/143 (82%), Positives = 126/143 (88%)
 Frame = -2

Query: 431 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 252
           MILLQSHSRFL Q+LLNR QNLEKGVELDHHWVEFDDVRYHIQVSMKNPH+         
Sbjct: 1   MILLQSHSRFLFQTLLNRAQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPT 60

Query: 251 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 72
             SETIFV G PFGAIEAIKAAYG LVQILDPPRDGFNLTLKINLSK+PANQE +H+FLV
Sbjct: 61  PSSETIFVCGPPFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAFLV 120

Query: 71  KVASVREVVLGAPLRVILKHLAS 3
           KVAS+REVVLGAPLRVIL+HLA+
Sbjct: 121 KVASIREVVLGAPLRVILEHLAA 143


>ref|XP_003547807.1| PREDICTED: actin-related protein 2/3 complex subunit 2 [Glycine
           max]
          Length = 320

 Score =  227 bits (578), Expect = 1e-57
 Identities = 116/143 (81%), Positives = 123/143 (86%)
 Frame = -2

Query: 431 MILLQSHSRFLLQSLLNRVQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHIXXXXXXXXX 252
           MILLQSH RFL Q LL   QNLEKGVELDHHWVEFDDVRYHIQVSMKNPH+         
Sbjct: 1   MILLQSHFRFLFQPLLIGPQNLEKGVELDHHWVEFDDVRYHIQVSMKNPHVLLLSVSLPT 60

Query: 251 XXSETIFVNGLPFGAIEAIKAAYGGLVQILDPPRDGFNLTLKINLSKIPANQEPRHSFLV 72
             SETIFV GLPFGAIEAIKAAYG LVQILDPPRDGFNLTLKINLSK+PANQE +H+FLV
Sbjct: 61  PSSETIFVCGLPFGAIEAIKAAYGNLVQILDPPRDGFNLTLKINLSKLPANQEQKHAFLV 120

Query: 71  KVASVREVVLGAPLRVILKHLAS 3
           KVAS+REVVLGAPLRVIL+HLA+
Sbjct: 121 KVASIREVVLGAPLRVILEHLAA 143


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