BLASTX nr result

ID: Glycyrrhiza24_contig00025679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025679
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621717.1| F-box protein [Medicago truncatula] gi|35549...    86   3e-15
ref|XP_003621713.1| F-box/LRR-repeat protein [Medicago truncatul...    82   3e-14
ref|XP_003610959.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    79   3e-13
gb|AFK42877.1| unknown [Lotus japonicus]                               78   7e-13
ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    77   2e-12

>ref|XP_003621717.1| F-box protein [Medicago truncatula] gi|355496732|gb|AES77935.1|
           F-box protein [Medicago truncatula]
          Length = 431

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/84 (51%), Positives = 51/84 (60%)
 Frame = +1

Query: 1   WDWLIDMLNGCPSLQNLVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYG 180
           W  LI  +  CPSLQ L I K  G + L S  D  NW  P FVP+C+ + L+ FS   YG
Sbjct: 309 WISLIKFICACPSLQTLTIRKIGGGYGLLSNDDHNNWPHPQFVPQCISSHLQMFSFINYG 368

Query: 181 GLESELQFTSYVMQNARVLRGVRI 252
           G  SELQFT YV+QNA +LR V I
Sbjct: 369 GNLSELQFTKYVVQNATLLRNVTI 392


>ref|XP_003621713.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355496728|gb|AES77931.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 294

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/81 (50%), Positives = 49/81 (60%)
 Frame = +1

Query: 1   WDWLIDMLNGCPSLQNLVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYG 180
           W  LI  +  CPSLQ L I K  G + L S  D  NW  P FVP+C+ + L+ FS   YG
Sbjct: 170 WISLIKFICACPSLQTLTIRKIGGGYGLLSNDDHNNWPHPQFVPQCISSHLQMFSFINYG 229

Query: 181 GLESELQFTSYVMQNARVLRG 243
           G  SELQFT YV+QNA +L G
Sbjct: 230 GNLSELQFTKYVVQNATLLIG 250


>ref|XP_003610959.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355512294|gb|AES93917.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 178

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/84 (44%), Positives = 53/84 (63%)
 Frame = +1

Query: 1   WDWLIDMLNGCPSLQNLVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYG 180
           W+W   +L+ CP LQNL I  NE      ++  D +W   H VPECL TQL+ F+++ Y 
Sbjct: 2   WNWFAQLLHSCPKLQNLTIH-NESL--CLNKVGDIHWNDQHIVPECLSTQLRTFTLKYYK 58

Query: 181 GLESELQFTSYVMQNARVLRGVRI 252
           G   E+QFT Y+MQN++VL+ + I
Sbjct: 59  GFNCEVQFTKYIMQNSKVLQNMTI 82


>gb|AFK42877.1| unknown [Lotus japonicus]
          Length = 112

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 40/78 (51%), Positives = 49/78 (62%)
 Frame = +1

Query: 19  MLNGCPSLQNLVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYGGLESEL 198
           ML  CP LQN V+D  +   D    SDD  W+ P  VPECL +QL+R S+  Y G ESEL
Sbjct: 5   MLKQCPMLQNFVLDMQKSYDD----SDDLVWISPCSVPECLSSQLRRCSIINYEGTESEL 60

Query: 199 QFTSYVMQNARVLRGVRI 252
            F  Y+MQN+RVLR + I
Sbjct: 61  HFAKYIMQNSRVLRKMTI 78


>ref|XP_003625380.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355500395|gb|AES81598.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 391

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 52/87 (59%)
 Frame = +1

Query: 1   WDWLIDMLNGCPSLQNLVIDKNEGTFDLSSRSDDKNWVQPHFVPECLKTQLKRFSVRKYG 180
           W+WL+ ML   P LQNL I  N+        + D+ W  P  VPECL +QLK   +R Y 
Sbjct: 279 WEWLLGMLKHSPKLQNLTIQDNKAI----EEAIDECWKDPPIVPECLSSQLKTCHIRVYK 334

Query: 181 GLESELQFTSYVMQNARVLRGVRICST 261
           G + +L+FT Y+M+N++VL  + I ST
Sbjct: 335 GTKYDLEFTKYIMENSKVLETMTINST 361


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