BLASTX nr result

ID: Glycyrrhiza24_contig00025674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025674
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer...    67   2e-09
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]    67   2e-09
ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus commun...    56   3e-06

>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
           gi|296083219|emb|CBI22855.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/47 (61%), Positives = 42/47 (89%)
 Frame = -2

Query: 145 LNPSLFFTMDNQRSMSLLQYMADEGLVPSPEEETKRRNAIQKLKQIV 5
           LNP++   M+++RS+SLLQ+M++EGL+PSPEEE KR+N I+KLK+IV
Sbjct: 63  LNPAVLVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIV 109


>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
          Length = 604

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/47 (61%), Positives = 42/47 (89%)
 Frame = -2

Query: 145 LNPSLFFTMDNQRSMSLLQYMADEGLVPSPEEETKRRNAIQKLKQIV 5
           LNP++   M+++RS+SLLQ+M++EGL+PSPEEE KR+N I+KLK+IV
Sbjct: 104 LNPAVLVRMEHRRSISLLQFMSNEGLIPSPEEELKRKNVIEKLKEIV 150


>ref|XP_002519259.1| poly(A) polymerase, putative [Ricinus communis]
           gi|223541574|gb|EEF43123.1| poly(A) polymerase, putative
           [Ricinus communis]
          Length = 492

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = -2

Query: 121 MDNQRSMSLLQYMADEGLVPSPEEETKRRNAIQKLKQIV 5
           M+ +RS+SLL++MA+EGLVPSP EE KR+N I  LKQIV
Sbjct: 1   MEEERSLSLLKFMANEGLVPSPREEEKRKNVILNLKQIV 39


Top