BLASTX nr result

ID: Glycyrrhiza24_contig00025668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025668
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638559.1| Nuclear receptor corepressor [Medicago trunc...   110   2e-22
ref|XP_003591951.1| Nuclear receptor corepressor [Medicago trunc...   110   2e-22
ref|XP_003556223.1| PREDICTED: uncharacterized protein LOC100810...   102   5e-20
ref|XP_003535535.1| PREDICTED: uncharacterized protein LOC100806...    98   7e-19
ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240...    84   1e-14

>ref|XP_003638559.1| Nuclear receptor corepressor [Medicago truncatula]
           gi|355504494|gb|AES85697.1| Nuclear receptor corepressor
           [Medicago truncatula]
          Length = 1655

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = +3

Query: 3   NFSRRQFNTNNNRSSVDDMLTYSSHPPSDFVNTWEQHHMEDHQHDKMDDVNGLGAGQICD 182
           N SRR  + NN + SVDD  TYSSHP SDFVNTWEQH+++D QH K   VNGLG G  CD
Sbjct: 127 NLSRRPQDMNNEQRSVDDSPTYSSHPHSDFVNTWEQHNLKD-QHAKTGGVNGLGTGPRCD 185

Query: 183 RNSSLHTIGWKPLNWTRSGSL 245
           R +SL +I WKPL WTRSGSL
Sbjct: 186 RENSLSSIDWKPLKWTRSGSL 206



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 32/45 (71%), Positives = 35/45 (77%)
 Frame = +2

Query: 401 YERKAGLQHKNATAVQSNSGEAATCETSSAPSEETNSRKKPRLNW 535
           YE K  L+HKN TAV+SNSGEA  C TSS PSE+  SRKKPRLNW
Sbjct: 228 YEGKPNLKHKNVTAVESNSGEATACVTSSMPSEDATSRKKPRLNW 272


>ref|XP_003591951.1| Nuclear receptor corepressor [Medicago truncatula]
           gi|355480999|gb|AES62202.1| Nuclear receptor corepressor
           [Medicago truncatula]
          Length = 1682

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/81 (65%), Positives = 60/81 (74%)
 Frame = +3

Query: 3   NFSRRQFNTNNNRSSVDDMLTYSSHPPSDFVNTWEQHHMEDHQHDKMDDVNGLGAGQICD 182
           N SRR  + NN + SVDD  TYSSHP SDFVNTWEQH+++D QH K   VNGLG G  CD
Sbjct: 127 NLSRRPQDMNNEQRSVDDSPTYSSHPHSDFVNTWEQHNLKD-QHAKTGGVNGLGTGPRCD 185

Query: 183 RNSSLHTIGWKPLNWTRSGSL 245
           R +SL +I WKPL WTRSGSL
Sbjct: 186 RENSLSSIDWKPLKWTRSGSL 206



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 32/45 (71%), Positives = 35/45 (77%)
 Frame = +2

Query: 401 YERKAGLQHKNATAVQSNSGEAATCETSSAPSEETNSRKKPRLNW 535
           YE K  L+HKN TAV+SNSGEA  C TSS PSE+  SRKKPRLNW
Sbjct: 228 YEGKPNLKHKNVTAVESNSGEATACVTSSMPSEDATSRKKPRLNW 272


>ref|XP_003556223.1| PREDICTED: uncharacterized protein LOC100810588 [Glycine max]
          Length = 765

 Score =  102 bits (253), Expect = 5e-20
 Identities = 49/81 (60%), Positives = 57/81 (70%)
 Frame = +3

Query: 3   NFSRRQFNTNNNRSSVDDMLTYSSHPPSDFVNTWEQHHMEDHQHDKMDDVNGLGAGQICD 182
           +F RRQ + NN+  S+DD L YS HP SDF N W+QHH++D QHDKM  VN  GAG  CD
Sbjct: 127 SFPRRQQDVNNDHRSIDDALAYSPHPHSDFGNAWDQHHLKD-QHDKMGGVNDFGAGPRCD 185

Query: 183 RNSSLHTIGWKPLNWTRSGSL 245
           R +SL    WKPL WTRSGSL
Sbjct: 186 RENSLG--DWKPLKWTRSGSL 204



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = +2

Query: 401 YERKAGLQHKNATAVQSNSGEAATCETSSAPSEETNSRKKPRLNW 535
           +E KA L  K+    +S+SGEAA C TSS PSE+T SRKKPRL W
Sbjct: 226 HEAKAELLPKSVAVNESHSGEAAACATSSVPSEDTTSRKKPRLGW 270


>ref|XP_003535535.1| PREDICTED: uncharacterized protein LOC100806246 [Glycine max]
          Length = 1372

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 49/81 (60%), Positives = 57/81 (70%)
 Frame = +3

Query: 3   NFSRRQFNTNNNRSSVDDMLTYSSHPPSDFVNTWEQHHMEDHQHDKMDDVNGLGAGQICD 182
           NF RR  + NN++ SVDD L YSSHP SDF N W+QHH++D QHDKM  VN  G G   D
Sbjct: 127 NFPRRLQDVNNDQRSVDDALAYSSHPHSDFGNAWDQHHLKD-QHDKMGGVNMFGTGPRSD 185

Query: 183 RNSSLHTIGWKPLNWTRSGSL 245
           R++SL    WKPL WTRSGSL
Sbjct: 186 RDNSLG--DWKPLKWTRSGSL 204



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/45 (62%), Positives = 33/45 (73%)
 Frame = +2

Query: 401 YERKAGLQHKNATAVQSNSGEAATCETSSAPSEETNSRKKPRLNW 535
           +E KA L  K+  A +S+SGEAA C TSS PSE+T SRKKPRL W
Sbjct: 226 HEVKAELLPKSVAANESHSGEAAACATSSVPSEDTTSRKKPRLGW 270


>ref|XP_002274774.2| PREDICTED: uncharacterized protein LOC100240985 [Vitis vinifera]
          Length = 1940

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 46/81 (56%), Positives = 54/81 (66%)
 Frame = +3

Query: 3   NFSRRQFNTNNNRSSVDDMLTYSSHPPSDFVNTWEQHHMEDHQHDKMDDVNGLGAGQICD 182
           N S R    N+ RS VDDML +S     DFVN W+Q  ++D QHDKM  VNGLG GQ  +
Sbjct: 258 NMSGRSLAINDQRS-VDDMLIHS-----DFVNGWDQLQLKD-QHDKMGSVNGLGTGQRAE 310

Query: 183 RNSSLHTIGWKPLNWTRSGSL 245
           R +SL +I WKPL WTRSGSL
Sbjct: 311 RENSLSSIDWKPLKWTRSGSL 331



 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 27/44 (61%), Positives = 32/44 (72%)
 Frame = +2

Query: 404 ERKAGLQHKNATAVQSNSGEAATCETSSAPSEETNSRKKPRLNW 535
           E +  LQ +N T VQS SG+A  C  S+APSEET+SRKKPRL W
Sbjct: 353 EARGDLQPRNVTPVQSPSGDAVACVASTAPSEETSSRKKPRLGW 396


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