BLASTX nr result

ID: Glycyrrhiza24_contig00025645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025645
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606478.1| RNA ligase isoform [Medicago truncatula] gi|...   207   7e-52
ref|XP_003606484.1| RNA ligase isoform [Medicago truncatula] gi|...   207   7e-52
ref|XP_004170424.1| PREDICTED: uncharacterized LOC101224355, par...   203   1e-50
ref|XP_004147268.1| PREDICTED: uncharacterized protein LOC101214...   203   1e-50
gb|AFK76482.1| tRNA ligase [Solanum melongena]                        200   9e-50

>ref|XP_003606478.1| RNA ligase isoform [Medicago truncatula]
           gi|355507533|gb|AES88675.1| RNA ligase isoform [Medicago
           truncatula]
          Length = 1237

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = +2

Query: 2   NFTVDNSTYAHARIRATFYPKFENEKSDQETRTRMIELVSKGLATLEVSLKHSGSLFMYA 181
           NFTVD+STYA ARIRATFYPKFENEKSDQETR+RMIELVSKGL TLEVSLKHSGSLFMYA
Sbjct: 89  NFTVDSSTYAQARIRATFYPKFENEKSDQETRSRMIELVSKGLLTLEVSLKHSGSLFMYA 148

Query: 182 GHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLE 325
           GHEGGAYAKNSFGNIYTAVGVFVLGRMF EAWGTEASKKQAEFN+FLE
Sbjct: 149 GHEGGAYAKNSFGNIYTAVGVFVLGRMFHEAWGTEASKKQAEFNDFLE 196


>ref|XP_003606484.1| RNA ligase isoform [Medicago truncatula]
           gi|355507539|gb|AES88681.1| RNA ligase isoform [Medicago
           truncatula]
          Length = 276

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = +2

Query: 2   NFTVDNSTYAHARIRATFYPKFENEKSDQETRTRMIELVSKGLATLEVSLKHSGSLFMYA 181
           NFTVD+STYA ARIRATFYPKFENEKSDQETR+RMIELVSKGL TLEVSLKHSGSLFMYA
Sbjct: 128 NFTVDSSTYAQARIRATFYPKFENEKSDQETRSRMIELVSKGLLTLEVSLKHSGSLFMYA 187

Query: 182 GHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLE 325
           GHEGGAYAKNSFGNIYTAVGVFVLGRMF EAWGTEASKKQAEFN+FLE
Sbjct: 188 GHEGGAYAKNSFGNIYTAVGVFVLGRMFHEAWGTEASKKQAEFNDFLE 235


>ref|XP_004170424.1| PREDICTED: uncharacterized LOC101224355, partial [Cucumis sativus]
          Length = 240

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/107 (92%), Positives = 103/107 (96%)
 Frame = +2

Query: 5   FTVDNSTYAHARIRATFYPKFENEKSDQETRTRMIELVSKGLATLEVSLKHSGSLFMYAG 184
           FTVDNSTY  A+IRATFYPKFENEKSDQE RTRMIE+VSKGLATLEVSLKHSGSLFMYAG
Sbjct: 134 FTVDNSTYTQAQIRATFYPKFENEKSDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAG 193

Query: 185 HEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLE 325
           HEGGAYAKNSFGNIYTAVGVFVLGRMFREAWG EA+KKQAEFN+FLE
Sbjct: 194 HEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGAEAAKKQAEFNDFLE 240


>ref|XP_004147268.1| PREDICTED: uncharacterized protein LOC101214899 [Cucumis sativus]
          Length = 1135

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/107 (92%), Positives = 103/107 (96%)
 Frame = +2

Query: 5   FTVDNSTYAHARIRATFYPKFENEKSDQETRTRMIELVSKGLATLEVSLKHSGSLFMYAG 184
           FTVDNSTY  A+IRATFYPKFENEKSDQE RTRMIE+VSKGLATLEVSLKHSGSLFMYAG
Sbjct: 134 FTVDNSTYTQAQIRATFYPKFENEKSDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAG 193

Query: 185 HEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLE 325
           HEGGAYAKNSFGNIYTAVGVFVLGRMFREAWG EA+KKQAEFN+FLE
Sbjct: 194 HEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGAEAAKKQAEFNDFLE 240


>gb|AFK76482.1| tRNA ligase [Solanum melongena]
          Length = 1167

 Score =  200 bits (509), Expect = 9e-50
 Identities = 96/108 (88%), Positives = 104/108 (96%)
 Frame = +2

Query: 2   NFTVDNSTYAHARIRATFYPKFENEKSDQETRTRMIELVSKGLATLEVSLKHSGSLFMYA 181
           NFTVDNST++ A++RATFYPKFENEKSDQE RTRMIE+VSKGLA +EV+LKHSGSLFMYA
Sbjct: 169 NFTVDNSTFSRAQVRATFYPKFENEKSDQEIRTRMIEMVSKGLAIVEVTLKHSGSLFMYA 228

Query: 182 GHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTEASKKQAEFNNFLE 325
           GHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGT+ASKKQAEFN FLE
Sbjct: 229 GHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGTKASKKQAEFNEFLE 276


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