BLASTX nr result

ID: Glycyrrhiza24_contig00025631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025631
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524010.1| PREDICTED: G2/mitotic-specific cyclin-1-like...   102   3e-20
ref|NP_001241621.1| uncharacterized protein LOC100812029 [Glycin...    96   2e-18
gb|ACI89426.1| cyclin B [Populus tomentosa]                            76   3e-12
ref|XP_002312806.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
gb|AEO86797.1| cyclin [Camellia sinensis]                              62   5e-08

>ref|XP_003524010.1| PREDICTED: G2/mitotic-specific cyclin-1-like [Glycine max]
          Length = 406

 Score =  102 bits (255), Expect = 3e-20
 Identities = 73/179 (40%), Positives = 90/179 (50%), Gaps = 13/179 (7%)
 Frame = +2

Query: 23  MEGSKENLPPLLHTNVQDYHTNGNNHLLQPQNLGIISRMESVKFPKEMTHTHHRRQPLSS 202
           MEGSKEN  P +              L+   NL    RM+ +          H R PL +
Sbjct: 1   MEGSKENCVPRIP-------------LIPSSNLQEGPRMKPLL---------HHRLPLGN 38

Query: 203 INQNITTHDKEEKPKPCVSVVNKLDLSRKCTAQTVQQHYAEETKNQNY-------QLDCV 361
           I+QN+     +         VNKLDLSRKCTA T+Q H+ +ETK QN        +LDC 
Sbjct: 39  ISQNVNMPHSQ---------VNKLDLSRKCTAHTIQHHFPQETKKQNLLAPNPSCKLDCD 89

Query: 362 IIDTDE-----YEDAVPVFVKHTEAMLDEIDRI-XXXXXXXXXXXXXXIDSLDRNDPLA 520
           I+D D+      +DAVPVFVKHTEAMLDEID+I               ID+ DR DPLA
Sbjct: 90  IVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACDRKDPLA 148


>ref|NP_001241621.1| uncharacterized protein LOC100812029 [Glycine max]
           gi|255635303|gb|ACU18005.1| unknown [Glycine max]
          Length = 415

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 74/186 (39%), Positives = 89/186 (47%), Gaps = 20/186 (10%)
 Frame = +2

Query: 23  MEGSKEN-LPPLLHTNVQDYHTNGNNHLLQPQNLGIISRMESVKFPKEMTHTHHRRQPLS 199
           MEGSKEN +PPL      +    G   +                  K + H HH R PL 
Sbjct: 1   MEGSKENRVPPLPLIPSSNLQQGGGPRM------------------KRLLH-HHHRLPLG 41

Query: 200 SINQNITTHDKEEKPKPCVSVVNKLDLSRKCTAQTVQQHYAE------ETKNQN------ 343
           +I+QN+  H          S VNKLDL+RK T  TVQ H+ +      E K QN      
Sbjct: 42  NISQNVMPH----------SHVNKLDLARKFTPHTVQHHFPQPHPQPQENKKQNLLAPTP 91

Query: 344 -YQLDCVIIDTDE-----YEDAVPVFVKHTEAMLDEIDRI-XXXXXXXXXXXXXXIDSLD 502
            YQLDC I+D D+      +DAVPVFVKHTEAMLDEID+I               ID+ D
Sbjct: 92  SYQLDCDIVDIDDDDGDGSDDAVPVFVKHTEAMLDEIDKIEEVEMEDVEEEPVLDIDACD 151

Query: 503 RNDPLA 520
           R D LA
Sbjct: 152 RKDTLA 157


>gb|ACI89426.1| cyclin B [Populus tomentosa]
          Length = 399

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
 Frame = +2

Query: 83  TNGNNH-LLQPQNLGIISRMESVKFPKEMTHTHHRRQPLSSINQNITTHDKEEKPKPCVS 259
           +N NN  L  P NL    RM   KF K+M    ++R+ L+SINQNI          PCV 
Sbjct: 4   SNENNPGLFVPLNLQEGPRMRGSKFVKDMGL--NQRRALASINQNIVG----AAHFPCV- 56

Query: 260 VVNKLDLSRKCTAQTV---QQHYAEETKNQNYQLDCVIIDTDEYEDA-VPVFVKHTEAML 427
            VNK D + +  A+ V   QQ Y E  K++    DC +I+ +EY+DA +P+FVKHTEAML
Sbjct: 57  -VNKRDSAEEMAAEMVSNKQQCYEETRKSK----DCSVIEVEEYDDAAIPMFVKHTEAML 111

Query: 428 DEIDRI 445
           DEIDR+
Sbjct: 112 DEIDRM 117


>ref|XP_002312806.1| predicted protein [Populus trichocarpa] gi|222849214|gb|EEE86761.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
 Frame = +2

Query: 83  TNGNNH-LLQPQNLGIISRMESVKFPKEMTHTHHRRQPLSSINQNITTHDKEEKPKPCVS 259
           +N NN  L  P NL    R+   KF K+M    ++R+ L+SINQNI          PCV 
Sbjct: 4   SNENNPGLFVPLNLQEGPRLGGSKFVKDMGL--NQRRALASINQNIVG----AAHFPCV- 56

Query: 260 VVNKLDLSRKCTAQTV---QQHYAEETKNQNYQLDCVIIDTDEYEDA-VPVFVKHTEAML 427
            VNK D S +  A+ V   QQ Y E  K++    DC +I+ +EY+DA +P+FVKHTEAML
Sbjct: 57  -VNKRDSSEEMAAEMVSNKQQCYEETRKSK----DCSVIEVEEYDDAAIPMFVKHTEAML 111

Query: 428 DEIDRI 445
           DEIDR+
Sbjct: 112 DEIDRM 117


>gb|AEO86797.1| cyclin [Camellia sinensis]
          Length = 439

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 62/199 (31%), Positives = 83/199 (41%), Gaps = 33/199 (16%)
 Frame = +2

Query: 23  MEGSKENLPPLLH-TNVQDYHTNGNNHLLQPQNLGIISRMESVKFPKEMTHTHHRRQPLS 199
           M GS ENLP ++  TN+Q     G   L                         H R+ LS
Sbjct: 1   MVGSDENLPGVIRPTNIQGGLHPGAGKLAAGMG--------------------HNRRALS 40

Query: 200 SINQNIT---THDKEEKPKPCVSVVNKLD---------------LSRKCTAQTV---QQH 316
           +IN+NI     +      +P +S  N L                ++RK  AQ     +Q 
Sbjct: 41  TINRNIVGAHPYPCAVNKRPALSEDNGLSNKNHPPIPPIPAHRPITRKFAAQMAGKQKQP 100

Query: 317 YAEETKNQNYQL-------DCVIIDTDEYEDA----VPVFVKHTEAMLDEIDRIXXXXXX 463
             EETK     L       DC IID D+Y+ A    VP+FV+HTEAML+EIDR+      
Sbjct: 101 LPEETKKVVQSLPVPTESGDCSIIDVDDYKAAGDSPVPMFVQHTEAMLEEIDRMEVEMED 160

Query: 464 XXXXXXXXIDSLDRNDPLA 520
                   ID+ D+ +PLA
Sbjct: 161 TTDDPVDDIDTSDKRNPLA 179


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