BLASTX nr result

ID: Glycyrrhiza24_contig00025630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025630
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containi...    86   3e-15

>ref|XP_003556682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18520-like [Glycine max]
          Length = 773

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 58/127 (45%), Positives = 66/127 (51%), Gaps = 16/127 (12%)
 Frame = -1

Query: 338 MELRTAAILHSCSSLXXXXXXXXXPAADFASPFSFSITNPLRTPCFTFTYR--------- 186
           MELRTA IL S SSL            DFA PFS  ++NPLR  CFTF  +         
Sbjct: 1   MELRTA-ILQSSSSLPPRFHTLKP-TPDFAFPFSLFVSNPLRLSCFTFVSKGDDPNSCYA 58

Query: 185 -------DQQHSFPTAASSRDTRAVLSCVGKGLTCTSTSGSACSYDDPNGGDEKRDNDHG 27
                  DQQHSFP  A  RDTRAVL+C+ +GL+CT  S   CS DD      KRD+D  
Sbjct: 59  NLFLGQADQQHSFPVTA--RDTRAVLNCISEGLSCTGASSGDCSCDD------KRDDDED 110

Query: 26  TGFFDNN 6
              F NN
Sbjct: 111 AMGFLNN 117


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