BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025627
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ...   280   1e-73
gb|AFN88216.1| pentatricopeptide repeat-containing protein [Phas...   257   8e-67
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]   239   2e-61
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi...   237   8e-61
ref|XP_002520572.1| pentatricopeptide repeat-containing protein,...   224   6e-57

>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519426|gb|AET01050.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  280 bits (715), Expect = 1e-73
 Identities = 135/152 (88%), Positives = 147/152 (96%)
 Frame = +2

Query: 8   VIPNAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAE 187
           VIPNAVTLASILPACS+MGSMG ARQLHGFSIR FLE+NVYVGT+L DTYSK GAISYAE
Sbjct: 524 VIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAE 583

Query: 188 NVFMRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTG 367
           NVF+RTPEKNSVTYTTMMM YGQHGMGK+ALTLYDSMLRSG++PDA+TFVAILSAC+Y+G
Sbjct: 584 NVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSG 643

Query: 368 LVDEGLQIFESMEKVYKIKPSIEHYCCVADIL 463
           LVDEGLQIFESMEKV+KIKPSIEHYCCVAD+L
Sbjct: 644 LVDEGLQIFESMEKVHKIKPSIEHYCCVADML 675



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
 Frame = +2

Query: 17  NAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENVF 196
           ++VT  ++L A S + ++   +Q H + IR  + Q   + + LID Y+KSG+I  AE +F
Sbjct: 425 DSVTATALLSAASNLRNLYVGKQTHAYLIRRGI-QFEGMESYLIDMYAKSGSIRTAELLF 483

Query: 197 MR--TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTG 367
            +  + +++  T+  ++  Y Q+G+ +KA+ L   ML   V P+A+T  +IL ACS  G
Sbjct: 484 EQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMG 542



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
 Frame = +2

Query: 23  VTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENVFMR 202
           VTL S+L A S +  +  A Q H F I+      + +  A++  YS+   +  +  VF +
Sbjct: 326 VTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDK 385

Query: 203 TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACS-----YTG 367
             E+++V++ T++ ++ Q+G  ++AL L   M +     D++T  A+LSA S     Y G
Sbjct: 386 MLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVG 445

Query: 368 ------LVDEGLQIFESME 406
                 L+  G+Q FE ME
Sbjct: 446 KQTHAYLIRRGIQ-FEGME 463



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
 Frame = +2

Query: 8   VIPNAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQ---NVYVGTALIDTYSKSGAIS 178
           V+P+ VT  ++ PA S +G     +  +GF +R F +Q   +V+V ++ I  +S  G + 
Sbjct: 217 VMPSPVTFVNLFPALSKLGDSRTVKMFYGF-MRKFGDQYVSDVFVVSSAILMFSDVGCMD 275

Query: 179 YAENVFMRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRS--GVKPDAITFVAILSA 352
           YA  VF R   KN+  + TM+++Y Q+    +A+ ++   L S  GV  D +T +++L+A
Sbjct: 276 YARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDD-VTLLSVLTA 334

Query: 353 CS 358
            S
Sbjct: 335 VS 336


>gb|AFN88216.1| pentatricopeptide repeat-containing protein [Phaseolus vulgaris]
          Length = 499

 Score =  257 bits (656), Expect = 8e-67
 Identities = 122/153 (79%), Positives = 140/153 (91%)
 Frame = +2

Query: 5   RVIPNAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYA 184
           +V PNAVTLASILP+CS+MGS   ARQLHGFSIR  L++NVYVGTAL+D YSK GAISYA
Sbjct: 194 KVTPNAVTLASILPSCSSMGSTAIARQLHGFSIRQLLDENVYVGTALVDAYSKLGAISYA 253

Query: 185 ENVFMRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYT 364
           ENVF+RT  KNSVTYTTM+MSYGQHGMGK+AL LYDSMLRSG+KPDA+TF+AILSACSY+
Sbjct: 254 ENVFIRTLAKNSVTYTTMIMSYGQHGMGKRALALYDSMLRSGIKPDAVTFIAILSACSYS 313

Query: 365 GLVDEGLQIFESMEKVYKIKPSIEHYCCVADIL 463
           GLV+EGL IFESM+K++KIKPS EHYCCVAD+L
Sbjct: 314 GLVEEGLHIFESMDKIHKIKPSTEHYCCVADML 346



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
 Frame = +2

Query: 17  NAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENVF 196
           ++VT+ ++L A S M      RQ H + IRH + Q   + + LID Y+KSG I+ +E +F
Sbjct: 96  DSVTVTALLSAASNMRDSYIGRQTHAYLIRHGI-QFEGMESYLIDMYAKSGLITTSELLF 154

Query: 197 MRT--PEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTG 367
            +    +++  ++  M+  Y Q+G+  KA+ +    L   V P+A+T  +IL +CS  G
Sbjct: 155 EQNGPSDRDLASWNAMIAGYTQNGLSDKAILILREALVRKVTPNAVTLASILPSCSSMG 213


>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  239 bits (610), Expect = 2e-61
 Identities = 113/152 (74%), Positives = 137/152 (90%)
 Frame = +2

Query: 8   VIPNAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAE 187
           V PNAVTLASILPAC+ MG++G  +Q+HGF+IR FL QNV+VGTAL+D YSKSGAI+YAE
Sbjct: 521 VRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAE 580

Query: 188 NVFMRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTG 367
           NVF  T EKNSVTYTTM++SYGQHGMG++AL+L+ +ML SG+KPD++TFVAILSACSY G
Sbjct: 581 NVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAG 640

Query: 368 LVDEGLQIFESMEKVYKIKPSIEHYCCVADIL 463
           LVDEGL+IF+SME+ YKI+PS EHYCCVAD+L
Sbjct: 641 LVDEGLRIFQSMEREYKIQPSSEHYCCVADML 672



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/127 (31%), Positives = 72/127 (56%), Gaps = 2/127 (1%)
 Frame = +2

Query: 17  NAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENVF 196
           ++VTL ++L   S + S    +Q H + IRH ++     G  LID Y+KSG I+ A+ +F
Sbjct: 422 DSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGMDGY-LIDMYAKSGLITTAQQLF 480

Query: 197 MRTP--EKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGL 370
            +    +++  T+  M+  Y Q+G+ ++   ++  M+   V+P+A+T  +IL AC+  G 
Sbjct: 481 EKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGT 540

Query: 371 VDEGLQI 391
           +  G QI
Sbjct: 541 IGLGKQI 547



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
 Frame = +2

Query: 23  VTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENVFMR 202
           VT  S L A S +  +   RQLH + ++      V +  A+I  YS+ G+I  +  VF  
Sbjct: 323 VTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSN 382

Query: 203 TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACS-------- 358
             E++ VT+ TM+ ++ Q+G+  + L L   M + G   D++T  A+LS  S        
Sbjct: 383 MLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIG 442

Query: 359 ---YTGLVDEGLQIFESME 406
              +  L+  G+Q FE M+
Sbjct: 443 KQAHAYLIRHGIQ-FEGMD 460


>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  237 bits (604), Expect = 8e-61
 Identities = 112/152 (73%), Positives = 136/152 (89%)
 Frame = +2

Query: 8   VIPNAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAE 187
           V PNAVTLASILPAC+ MG++G  +Q+HGF+IR FL +NV+VGTAL+D YSKSGAI+YAE
Sbjct: 521 VRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAE 580

Query: 188 NVFMRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTG 367
           NVF  T EKNSVTYTTM+ SYGQHGMG++AL+L+ +ML SG+KPD++TFVAILSACSY G
Sbjct: 581 NVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAG 640

Query: 368 LVDEGLQIFESMEKVYKIKPSIEHYCCVADIL 463
           LVDEGL+IF+SME+ YKI+PS EHYCCVAD+L
Sbjct: 641 LVDEGLRIFQSMEREYKIQPSAEHYCCVADML 672



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/127 (31%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
 Frame = +2

Query: 17  NAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENVF 196
           ++VTL ++L   S + S    +Q H + IRH + Q   + + LID Y+KSG I+ A+ +F
Sbjct: 422 DSVTLTALLSLASNLRSQEIGKQAHAYLIRHGI-QFEGMDSYLIDMYAKSGLITTAQQLF 480

Query: 197 MRTPE--KNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGL 370
            +  +  ++  T+  M+  Y Q+G+ ++   ++  M+   V+P+A+T  +IL AC+  G 
Sbjct: 481 EKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGT 540

Query: 371 VDEGLQI 391
           +  G QI
Sbjct: 541 IGLGKQI 547



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
 Frame = +2

Query: 23  VTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENVFMR 202
           VT  S L A S +  +   RQLH + ++      V +  A+I  YS+ G+I  +  VF  
Sbjct: 323 VTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSN 382

Query: 203 TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACS-------- 358
             E++ VT+ TM+ ++ Q+G+  + L L  +M + G   D++T  A+LS  S        
Sbjct: 383 MLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIG 442

Query: 359 ---YTGLVDEGLQIFESME 406
              +  L+  G+Q FE M+
Sbjct: 443 KQAHAYLIRHGIQ-FEGMD 460


>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  224 bits (571), Expect = 6e-57
 Identities = 104/150 (69%), Positives = 133/150 (88%)
 Frame = +2

Query: 14  PNAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENV 193
           PNAVTLASILPACS++GS+   +QLHG SIR+ L+QN++V TAL+D YSKSGAI+YAE+V
Sbjct: 405 PNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESV 464

Query: 194 FMRTPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYTGLV 373
           F ++ E+NSVTYTTM++ YGQHGMG+ AL+L+ SM +SG++PDAITFVA+LSACSY GLV
Sbjct: 465 FTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLV 524

Query: 374 DEGLQIFESMEKVYKIKPSIEHYCCVADIL 463
           DEGL+IFESM++ +KI+PS  HYCCVAD+L
Sbjct: 525 DEGLRIFESMKRDFKIQPSTAHYCCVADML 554



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 41/129 (31%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
 Frame = +2

Query: 11  IPNAVTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAEN 190
           I ++VT+ S+L A S + +    +Q H + IRH ++ +  + + LID Y+KSG I  ++ 
Sbjct: 302 IADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG-MDSYLIDMYAKSGLIRISQR 360

Query: 191 VFMRTPEKN--SVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACSYT 364
           VF     +N    T+  ++  Y Q+G+ ++A   +  ML   ++P+A+T  +IL ACS  
Sbjct: 361 VFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSL 420

Query: 365 GLVDEGLQI 391
           G ++ G Q+
Sbjct: 421 GSINLGKQL 429



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/112 (31%), Positives = 65/112 (58%)
 Frame = +2

Query: 23  VTLASILPACSTMGSMGFARQLHGFSIRHFLEQNVYVGTALIDTYSKSGAISYAENVFMR 202
           VT  S L A S +  +G  +Q+H F++++    +V V  A++  YS+  ++  +  VF +
Sbjct: 205 VTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEK 264

Query: 203 TPEKNSVTYTTMMMSYGQHGMGKKALTLYDSMLRSGVKPDAITFVAILSACS 358
            PEK+ V++ TM+  + Q+G+ ++ L L   M + G   D++T  ++LSA S
Sbjct: 265 MPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAAS 316