BLASTX nr result

ID: Glycyrrhiza24_contig00025625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025625
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610502.1| Integrator complex subunit-like protein [Med...    97   1e-18
emb|CBI24224.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...    78   9e-13
ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm...    72   5e-11
ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula]
           gi|355511557|gb|AES92699.1| Integrator complex
           subunit-like protein [Medicago truncatula]
          Length = 560

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 52/79 (65%), Positives = 57/79 (72%)
 Frame = +1

Query: 4   MTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEG 183
           MT+         VDNYD+EHK IIVKGVS AF+ L S+GVIQSLD+LTSCP LSPSLKEG
Sbjct: 394 MTNTLLEFLLLLVDNYDMEHKDIIVKGVSLAFRFLESKGVIQSLDILTSCPTLSPSLKEG 453

Query: 184 LGRLLSGVKLGSSNGFLQG 240
           L RLLS  K  SS  FL G
Sbjct: 454 LSRLLSSGKPESSKEFLPG 472


>emb|CBI24224.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/65 (61%), Positives = 46/65 (70%)
 Frame = +1

Query: 4   MTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEG 183
           MT          VDNYD+E K IIV+GV+SAF +LV RGV+ S+ VLTSC ALSPSLKE 
Sbjct: 279 MTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLVRRGVVGSIHVLTSCDALSPSLKEW 338

Query: 184 LGRLL 198
           LGR L
Sbjct: 339 LGRFL 343


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/65 (61%), Positives = 46/65 (70%)
 Frame = +1

Query: 4   MTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEG 183
           MT          VDNYD+E K IIV+GV+SAF +LV RGV+ S+ VLTSC ALSPSLKE 
Sbjct: 379 MTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLVRRGVVGSIHVLTSCDALSPSLKEW 438

Query: 184 LGRLL 198
           LGR L
Sbjct: 439 LGRFL 443


>ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis]
           gi|223533602|gb|EEF35340.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 982

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/71 (52%), Positives = 48/71 (67%)
 Frame = +1

Query: 4   MTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEG 183
           MT++        V+NYD++   +I +G+ SAF +LV +GVI SLDVLTSC ALSP LK+ 
Sbjct: 354 MTNSLLEFLLLLVENYDLDRPHVISRGILSAFNVLVQKGVIHSLDVLTSCDALSPCLKQR 413

Query: 184 LGRLLSGVKLG 216
           LGRL S  K G
Sbjct: 414 LGRLWSSSKPG 424


>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/52 (50%), Positives = 42/52 (80%)
 Frame = +1

Query: 43  DNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEGLGRLL 198
           +NY+ +   +I +G+SSA ++LV +GV++S+D+LTSC ALSP L+EGL +L+
Sbjct: 407 ENYEEDRNYVIRRGLSSAMRMLVQKGVVRSMDILTSCDALSPFLREGLRKLI 458


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