BLASTX nr result
ID: Glycyrrhiza24_contig00025625
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00025625 (492 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003610502.1| Integrator complex subunit-like protein [Med... 97 1e-18 emb|CBI24224.3| unnamed protein product [Vitis vinifera] 78 9e-13 ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo... 78 9e-13 ref|XP_002527040.1| conserved hypothetical protein [Ricinus comm... 72 5e-11 ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 >ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula] gi|355511557|gb|AES92699.1| Integrator complex subunit-like protein [Medicago truncatula] Length = 560 Score = 97.4 bits (241), Expect = 1e-18 Identities = 52/79 (65%), Positives = 57/79 (72%) Frame = +1 Query: 4 MTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEG 183 MT+ VDNYD+EHK IIVKGVS AF+ L S+GVIQSLD+LTSCP LSPSLKEG Sbjct: 394 MTNTLLEFLLLLVDNYDMEHKDIIVKGVSLAFRFLESKGVIQSLDILTSCPTLSPSLKEG 453 Query: 184 LGRLLSGVKLGSSNGFLQG 240 L RLLS K SS FL G Sbjct: 454 LSRLLSSGKPESSKEFLPG 472 >emb|CBI24224.3| unnamed protein product [Vitis vinifera] Length = 563 Score = 77.8 bits (190), Expect = 9e-13 Identities = 40/65 (61%), Positives = 46/65 (70%) Frame = +1 Query: 4 MTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEG 183 MT VDNYD+E K IIV+GV+SAF +LV RGV+ S+ VLTSC ALSPSLKE Sbjct: 279 MTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLVRRGVVGSIHVLTSCDALSPSLKEW 338 Query: 184 LGRLL 198 LGR L Sbjct: 339 LGRFL 343 >ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera] Length = 928 Score = 77.8 bits (190), Expect = 9e-13 Identities = 40/65 (61%), Positives = 46/65 (70%) Frame = +1 Query: 4 MTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEG 183 MT VDNYD+E K IIV+GV+SAF +LV RGV+ S+ VLTSC ALSPSLKE Sbjct: 379 MTHTLLEFLLLLVDNYDIERKDIIVRGVASAFNMLVRRGVVGSIHVLTSCDALSPSLKEW 438 Query: 184 LGRLL 198 LGR L Sbjct: 439 LGRFL 443 >ref|XP_002527040.1| conserved hypothetical protein [Ricinus communis] gi|223533602|gb|EEF35340.1| conserved hypothetical protein [Ricinus communis] Length = 982 Score = 72.0 bits (175), Expect = 5e-11 Identities = 37/71 (52%), Positives = 48/71 (67%) Frame = +1 Query: 4 MTDAXXXXXXXXVDNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEG 183 MT++ V+NYD++ +I +G+ SAF +LV +GVI SLDVLTSC ALSP LK+ Sbjct: 354 MTNSLLEFLLLLVENYDLDRPHVISRGILSAFNVLVQKGVIHSLDVLTSCDALSPCLKQR 413 Query: 184 LGRLLSGVKLG 216 LGRL S K G Sbjct: 414 LGRLWSSSKPG 424 >ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1| predicted protein [Populus trichocarpa] Length = 995 Score = 60.8 bits (146), Expect = 1e-07 Identities = 26/52 (50%), Positives = 42/52 (80%) Frame = +1 Query: 43 DNYDVEHKGIIVKGVSSAFQLLVSRGVIQSLDVLTSCPALSPSLKEGLGRLL 198 +NY+ + +I +G+SSA ++LV +GV++S+D+LTSC ALSP L+EGL +L+ Sbjct: 407 ENYEEDRNYVIRRGLSSAMRMLVQKGVVRSMDILTSCDALSPFLREGLRKLI 458