BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025599
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   157   9e-37
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   154   6e-36
ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   127   1e-27

>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  157 bits (397), Expect = 9e-37
 Identities = 79/99 (79%), Positives = 84/99 (84%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   GLSSWNSIIIGLAMNGHEREAIEFFSKLESSKL-KPDHVTFIGVLTACKHLGAVDKARDY 177
           GLS WNSIIIGLAMNGHEREA EFFSKLESSKL KPD V+FIGVLTACKHLGA++KARDY
Sbjct: 328 GLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDY 387

Query: 178 FALMMNKYKIEPSIKHYTCMVDVLGQXXXXXXXXXXIKG 294
           F LMMNKY+IEPSIKHYTC+VDVLGQ          IKG
Sbjct: 388 FELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKG 426


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  154 bits (390), Expect = 6e-36
 Identities = 74/98 (75%), Positives = 85/98 (86%)
 Frame = +1

Query: 1   GLSSWNSIIIGLAMNGHEREAIEFFSKLESSKLKPDHVTFIGVLTACKHLGAVDKARDYF 180
           GLS WNSIIIGLA+NG+ER+AIE+FSKLE+S LKPDHV+FIGVLTACK++GAV KARDYF
Sbjct: 321 GLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYF 380

Query: 181 ALMMNKYKIEPSIKHYTCMVDVLGQXXXXXXXXXXIKG 294
           +LMMNKY+IEPSIKHYTCMV+VLGQ          IKG
Sbjct: 381 SLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKG 418


>ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/85 (72%), Positives = 71/85 (83%)
 Frame = +1

Query: 1   GLSSWNSIIIGLAMNGHEREAIEFFSKLESSKLKPDHVTFIGVLTACKHLGAVDKARDYF 180
           GLS WNS+I+GLAM+G   EA+  FSKLESS LKPDHV+FIGVLTAC H G VD+A+DYF
Sbjct: 294 GLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYF 353

Query: 181 ALMMNKYKIEPSIKHYTCMVDVLGQ 255
            LM   YKIEPSIKHY+CMVDVLG+
Sbjct: 354 LLMSETYKIEPSIKHYSCMVDVLGR 378


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/85 (69%), Positives = 72/85 (84%)
 Frame = +1

Query: 1   GLSSWNSIIIGLAMNGHEREAIEFFSKLESSKLKPDHVTFIGVLTACKHLGAVDKARDYF 180
           GLSSWN++I+GLAMNG E EAI+ FS+LE S L+PD VTF+GVLTAC + G VDKA++YF
Sbjct: 322 GLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYF 381

Query: 181 ALMMNKYKIEPSIKHYTCMVDVLGQ 255
           +LM   YKIEPSIKHY+CMVD LG+
Sbjct: 382 SLMSKTYKIEPSIKHYSCMVDTLGR 406


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/85 (68%), Positives = 71/85 (83%)
 Frame = +1

Query: 1   GLSSWNSIIIGLAMNGHEREAIEFFSKLESSKLKPDHVTFIGVLTACKHLGAVDKARDYF 180
           GLS WNS+I+GLAMNG E EA++ FS L+SS L+PD V+FI VLTAC H G VDKA+DYF
Sbjct: 319 GLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYF 378

Query: 181 ALMMNKYKIEPSIKHYTCMVDVLGQ 255
            LM +KYKI+P IKH++CMVDVLG+
Sbjct: 379 LLMRDKYKIKPGIKHFSCMVDVLGR 403