BLASTX nr result

ID: Glycyrrhiza24_contig00025583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025583
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47046.1| unknown [Lotus japonicus]                              174   2e-41
ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   172   6e-41
ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containi...   166   3e-39
emb|CBI21840.3| unnamed protein product [Vitis vinifera]              101   1e-19
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...   101   1e-19

>gb|AFK47046.1| unknown [Lotus japonicus]
          Length = 496

 Score =  174 bits (440), Expect = 2e-41
 Identities = 97/156 (62%), Positives = 109/156 (69%), Gaps = 2/156 (1%)
 Frame = -2

Query: 712 RIPNLMITAYCRWGLLDKAEAYIARLLDNGKELDRSTWERLAGGYRMDNAMEKAVETMKK 533
           RIPNLMITAYC+ GLLDKAEAYI +LLD+GK+LD S+W+R+A GY MDN MEKAV+TMKK
Sbjct: 346 RIPNLMITAYCKRGLLDKAEAYIQKLLDSGKKLDGSSWDRMAAGYHMDNDMEKAVQTMKK 405

Query: 532 VILAXXXXXXXXXXPFILFSCIKYLKEKGDLEPALEILKLF--NGHISATAYDGLVSYVD 359
            ILA             L +CI YLKEK DLE ALEILKL   +GHI  T YDGLVSY  
Sbjct: 406 AILANRPGWRPSPS--TLVACITYLKEKLDLESALEILKLCKEDGHIKITTYDGLVSYAH 463

Query: 358 GERPYTEAFDLIKRDYQMDENVQLFDGENQWLNEKD 251
           GE P  EA DL+KRDYQM       DG+  W N KD
Sbjct: 464 GEIPDKEALDLMKRDYQM-------DGKKLWENIKD 492


>ref|XP_003541912.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20710, mitochondrial-like [Glycine max]
          Length = 482

 Score =  172 bits (436), Expect = 6e-41
 Identities = 94/151 (62%), Positives = 106/151 (70%), Gaps = 4/151 (2%)
 Frame = -2

Query: 712 RIPNLMITAYCRWGLLDKAEAYIARLLDNGKELDRSTWERLAGGYRMDNAMEKAVETMKK 533
           RIPNLMI+AYC+WG  DKAEAYI RLLD GK+LD  TW+RLA GY+  N MEKAV+ MKK
Sbjct: 334 RIPNLMISAYCKWGQFDKAEAYIRRLLDGGKQLDGRTWDRLACGYKAGNDMEKAVQAMKK 393

Query: 532 VILAXXXXXXXXXXPFILFSCIKYLKEKGDLEPALEILKLF--NGHISATAYDGLVSYVD 359
            +            PF L +C+KYLKEKGDL+ ALEILKL   N HIS T+YDGL SYV 
Sbjct: 394 AV--SKNLGGRRPDPFTLVACVKYLKEKGDLDLALEILKLCIENSHISVTSYDGLSSYVH 451

Query: 358 GERPYTEAFDLIKRDYQM--DENVQLFDGEN 272
            E P T   DLIK DYQM  +EN QL DGEN
Sbjct: 452 SETPDTGPLDLIKGDYQMFENENTQLLDGEN 482


>ref|XP_003539532.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Glycine max]
          Length = 483

 Score =  166 bits (421), Expect = 3e-39
 Identities = 94/153 (61%), Positives = 105/153 (68%), Gaps = 6/153 (3%)
 Frame = -2

Query: 712 RIPNLMITAYCRWGLLDKAEAYIARLLDNGKELDRSTWERLAGGYRMDNAMEKAVETMKK 533
           RIPNLMI+AYC+WG  DKAEAYI RLLD GK LD  TW+RLA GY   N ME AV+ MKK
Sbjct: 333 RIPNLMISAYCKWGQFDKAEAYIRRLLDGGKHLDGRTWDRLACGYNAGNDMENAVQAMKK 392

Query: 532 VILAXXXXXXXXXXPFILFSCIKYLKEKGDLEPALEILKLF--NGHISATAYDGLVSYV- 362
            +            PF L +C+KYLKEKGDL+ ALEILKL   N HIS T+YDGLVSYV 
Sbjct: 393 AV--STNLAGRRPDPFTLVACVKYLKEKGDLDLALEILKLCIENSHISVTSYDGLVSYVR 450

Query: 361 -DGERPYTEAFDLIKRDYQM--DENVQLFDGEN 272
            + E P TE  DLIK DYQM  +EN QL  GEN
Sbjct: 451 SETETPDTEPLDLIKGDYQMFENENTQLLGGEN 483


>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score =  101 bits (252), Expect = 1e-19
 Identities = 54/124 (43%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
 Frame = -2

Query: 712 RIPNLMITAYCRWGLLDKAEAYIARLLDNGKELDRSTWERLAGGYRMDNAMEKAVETMKK 533
           R+PNL+I AYC+ GLL+KAE  ++R ++ G+E    TW+ LA GY  +N MEKAV+T+KK
Sbjct: 294 RVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKK 353

Query: 532 VILAXXXXXXXXXXPFILFSCIKYLKEKGDLEPALEILKLFNGHISATAYDG--LVSYVD 359
            +LA          P  L +C++YLK KGD+E A  +++L       +AYD   LV+Y+ 
Sbjct: 354 ALLA--TSQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVSAYDSDRLVNYIR 411

Query: 358 GERP 347
            E P
Sbjct: 412 SEEP 415


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score =  101 bits (252), Expect = 1e-19
 Identities = 54/124 (43%), Positives = 78/124 (62%), Gaps = 2/124 (1%)
 Frame = -2

Query: 712 RIPNLMITAYCRWGLLDKAEAYIARLLDNGKELDRSTWERLAGGYRMDNAMEKAVETMKK 533
           R+PNL+I AYC+ GLL+KAE  ++R ++ G+E    TW+ LA GY  +N MEKAV+T+KK
Sbjct: 347 RVPNLLIRAYCKKGLLEKAEQLVSRAIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKK 406

Query: 532 VILAXXXXXXXXXXPFILFSCIKYLKEKGDLEPALEILKLFNGHISATAYDG--LVSYVD 359
            +LA          P  L +C++YLK KGD+E A  +++L       +AYD   LV+Y+ 
Sbjct: 407 ALLA--TSQGWKPNPVTLSACLEYLKGKGDVEEAENLIRLLREQSLVSAYDSDRLVNYIR 464

Query: 358 GERP 347
            E P
Sbjct: 465 SEEP 468


Top