BLASTX nr result

ID: Glycyrrhiza24_contig00025577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025577
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540680.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    57   1e-07

>ref|XP_003540680.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Glycine max]
          Length = 1016

 Score = 57.4 bits (137), Expect(3) = 1e-07
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +3

Query: 78  WEALEASIEAQFEVIRSRGSDAHVVPTHCG 167
           WE LEA+IEA+FE IRSRG++AHVVPTHCG
Sbjct: 118 WETLEAAIEAEFEAIRSRGANAHVVPTHCG 147



 Score = 21.6 bits (44), Expect(3) = 1e-07
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 49  RQTPTNLSAS 78
           RQTP NLSAS
Sbjct: 72  RQTPNNLSAS 81



 Score = 20.8 bits (42), Expect(3) = 1e-07
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 14  PPHTPSVHNGPLVKPLPT 67
           P   P+ HNGPL +   T
Sbjct: 57  PLFPPAPHNGPLTRARQT 74


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