BLASTX nr result

ID: Glycyrrhiza24_contig00025558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025558
         (1205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606129.1| Bifunctional polymyxin resistance arnA prote...   686   0.0  
ref|XP_003538124.1| PREDICTED: bifunctional polymyxin resistance...   676   0.0  
ref|XP_003540793.1| PREDICTED: bifunctional polymyxin resistance...   671   0.0  
gb|ACJ11753.1| UDP-D-apiose/UPD-D-xylose synthetase [Gossypium h...   608   e-172
ref|XP_002892446.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabid...   608   e-171

>ref|XP_003606129.1| Bifunctional polymyxin resistance arnA protein [Medicago truncatula]
            gi|355507184|gb|AES88326.1| Bifunctional polymyxin
            resistance arnA protein [Medicago truncatula]
          Length = 381

 Score =  686 bits (1769), Expect = 0.0
 Identities = 327/367 (89%), Positives = 350/367 (95%)
 Frame = +1

Query: 1    VSICMIGAGGFIGSHLCEKLMLETPHKVLALDVYNDKINHLLDKALPWAHRIEFHHMNIK 180
            +SIC+IG GGFIGSHL EKLM ET HK + +DV ++K+NHLLDK+ PWA+RIEFH MNIK
Sbjct: 14   ISICLIGGGGFIGSHLTEKLMSETSHKAIVIDVSSEKVNHLLDKSHPWANRIEFHQMNIK 73

Query: 181  NDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHFS 360
            NDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNF+DAIPV+KFCTENNKRLIHFS
Sbjct: 74   NDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFIDAIPVIKFCTENNKRLIHFS 133

Query: 361  TCEVFGKTIGSFLPQEYRQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEH 540
            TCEVFGKTIGSFLP+EYR++P+YY LKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEH
Sbjct: 134  TCEVFGKTIGSFLPEEYRKEPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEH 193

Query: 541  AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQR 720
            AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGG SQR
Sbjct: 194  AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQR 253

Query: 721  TFLYIKDAIEAVLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPASSL 900
            TFLYIKDAIEAV+LMIDNP+RANGHIFNVGNP+NE SVK+LAELMIKVYAKV+GVP SSL
Sbjct: 254  TFLYIKDAIEAVMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIKVYAKVAGVPESSL 313

Query: 901  STLDVSSMDFYGKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSHAIK 1080
            STLDVSS  FYGKGYDDSDRRIPDMTIIT+QLGWKP+T LD+LLD TLQYQHQTYSHAIK
Sbjct: 314  STLDVSSEVFYGKGYDDSDRRIPDMTIITKQLGWKPKTSLDDLLDSTLQYQHQTYSHAIK 373

Query: 1081 KELSKPS 1101
            KELSKPS
Sbjct: 374  KELSKPS 380


>ref|XP_003538124.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
            [Glycine max]
          Length = 381

 Score =  676 bits (1743), Expect = 0.0
 Identities = 320/368 (86%), Positives = 350/368 (95%)
 Frame = +1

Query: 1    VSICMIGAGGFIGSHLCEKLMLETPHKVLALDVYNDKINHLLDKALPWAHRIEFHHMNIK 180
            ++ICMIG GGFIGSHLCEKLM ET HK + +DV ++KINHLLD++LPWAHRIEFH MNIK
Sbjct: 14   LAICMIGGGGFIGSHLCEKLMAETNHKAVVVDVSSEKINHLLDRSLPWAHRIEFHQMNIK 73

Query: 181  NDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHFS 360
            +DSRLETLV+ +DLTINLAAICTPADYNTRPLDTI+SNF+DAIPV+K+CTENNKRLIHFS
Sbjct: 74   SDSRLETLVQTTDLTINLAAICTPADYNTRPLDTIFSNFIDAIPVIKYCTENNKRLIHFS 133

Query: 361  TCEVFGKTIGSFLPQEYRQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEH 540
            TCEV+GKTIGSFLP+EYRQDPKY+MLKEDV+PC FGPV KQRWSYACAKQMTDRLIYAEH
Sbjct: 134  TCEVYGKTIGSFLPEEYRQDPKYFMLKEDVTPCTFGPVEKQRWSYACAKQMTDRLIYAEH 193

Query: 541  AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQR 720
            AENGLKFTIVRPYNWIGPRMDFIPGVDGP DGVPRVLACFSN+LLRGEPLKLV+GGRSQR
Sbjct: 194  AENGLKFTIVRPYNWIGPRMDFIPGVDGPCDGVPRVLACFSNSLLRGEPLKLVEGGRSQR 253

Query: 721  TFLYIKDAIEAVLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPASSL 900
            TFLYIKDAI+AV LMIDNPERA+GHIFNVGNP+NE SVKELAELMIK YAKVSGVPASSL
Sbjct: 254  TFLYIKDAIDAVALMIDNPERADGHIFNVGNPDNEVSVKELAELMIKAYAKVSGVPASSL 313

Query: 901  STLDVSSMDFYGKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSHAIK 1080
            STLDVS+ DFYGKGYDDSDRRIPDMTIIT+QL WKP+TPLDELLDVTLQYQH+TYS AI+
Sbjct: 314  STLDVSAEDFYGKGYDDSDRRIPDMTIITKQLAWKPKTPLDELLDVTLQYQHKTYSRAIQ 373

Query: 1081 KELSKPSN 1104
            +ELSK SN
Sbjct: 374  RELSKLSN 381


>ref|XP_003540793.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
            [Glycine max]
          Length = 381

 Score =  671 bits (1730), Expect = 0.0
 Identities = 318/368 (86%), Positives = 349/368 (94%)
 Frame = +1

Query: 1    VSICMIGAGGFIGSHLCEKLMLETPHKVLALDVYNDKINHLLDKALPWAHRIEFHHMNIK 180
            ++ICMIG GGFIGSHLCEKLM ET HK + +DV ++KINHLLD++LPWAHRIEFH MNIK
Sbjct: 14   LAICMIGGGGFIGSHLCEKLMAETNHKAVVVDVSSEKINHLLDRSLPWAHRIEFHQMNIK 73

Query: 181  NDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHFS 360
            +DSRLETLV+ +DLTINLAAI TPADYNTRPLDTI+ NF+DAIPV+K+CTENNKRLIHFS
Sbjct: 74   SDSRLETLVQTTDLTINLAAIYTPADYNTRPLDTIFGNFIDAIPVIKYCTENNKRLIHFS 133

Query: 361  TCEVFGKTIGSFLPQEYRQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEH 540
            TCEV+GKTIGSFLP+EYRQDPKY+MLKEDV+PCIFGPV KQRWSYACAKQMTDRLIYAEH
Sbjct: 134  TCEVYGKTIGSFLPEEYRQDPKYFMLKEDVTPCIFGPVEKQRWSYACAKQMTDRLIYAEH 193

Query: 541  AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQR 720
            AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSN+LLRGEPLKLVDGGRSQR
Sbjct: 194  AENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNSLLRGEPLKLVDGGRSQR 253

Query: 721  TFLYIKDAIEAVLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPASSL 900
            TFLYIKDAI+AV LMIDNPERANG+IFNVGNP+NE SVKELAELMIK YAKVSG PASSL
Sbjct: 254  TFLYIKDAIDAVALMIDNPERANGYIFNVGNPDNEVSVKELAELMIKAYAKVSGAPASSL 313

Query: 901  STLDVSSMDFYGKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSHAIK 1080
            ST+DVS+ DFYGKGYDDSDRRIPDMTIIT+QL WKP+T L+ELLDVTLQYQH+TYS AI+
Sbjct: 314  STVDVSAEDFYGKGYDDSDRRIPDMTIITKQLAWKPKTLLEELLDVTLQYQHKTYSRAIE 373

Query: 1081 KELSKPSN 1104
            +ELSKPSN
Sbjct: 374  RELSKPSN 381


>gb|ACJ11753.1| UDP-D-apiose/UPD-D-xylose synthetase [Gossypium hirsutum]
          Length = 386

 Score =  608 bits (1568), Expect = e-172
 Identities = 289/370 (78%), Positives = 332/370 (89%), Gaps = 3/370 (0%)
 Frame = +1

Query: 1    VSICMIGAGGFIGSHLCEKLMLETPHKVLALDVYNDKINHLLDK-ALPWAHRIEFHHMNI 177
            ++ICMIGAGGFIGSHLCEKLM ETPHKVLALDVYNDKI HLL+  +LPWA RI+FH +NI
Sbjct: 15   LTICMIGAGGFIGSHLCEKLMSETPHKVLALDVYNDKIKHLLEPDSLPWAGRIQFHRLNI 74

Query: 178  KNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHF 357
            K+DSRLE L+K +DLTINLAAICTPADYNTRPLDTIYSNF+DA+PVVK+C+ENNKRLIHF
Sbjct: 75   KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 134

Query: 358  STCEVFGKTIGSFLPQE--YRQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIY 531
            STCEV+GKTIGSFLP++   RQDP YY+LKED SPCIFG + KQRWSYACAKQ+ +RLIY
Sbjct: 135  STCEVYGKTIGSFLPKDSPLRQDPAYYVLKEDTSPCIFGSIEKQRWSYACAKQLIERLIY 194

Query: 532  AEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGR 711
            AE AE GL+FTIVRP+NWIGPRMDFIPG+DGPS+GVPRVLACFSNNLLR EPLKLVDGG 
Sbjct: 195  AEGAETGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGE 254

Query: 712  SQRTFLYIKDAIEAVLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPA 891
            SQRTF+YIKDAIEAVLLMI+NP+RANGHIFNVGNPNNE +V++LAE+M KVYAKVSG   
Sbjct: 255  SQRTFIYIKDAIEAVLLMIENPDRANGHIFNVGNPNNEVTVRQLAEMMTKVYAKVSGETV 314

Query: 892  SSLSTLDVSSMDFYGKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSH 1071
                T+DVSS +FYG+GYDDSD+RIPDMTII +QLGW P+T L +LL+ TL YQH+TY+ 
Sbjct: 315  LESPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHRTYAE 374

Query: 1072 AIKKELSKPS 1101
            AIKK ++KPS
Sbjct: 375  AIKKSIAKPS 384


>ref|XP_002892446.1| UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata subsp.
            lyrata] gi|297338288|gb|EFH68705.1|
            UDP-D-apiose/UDP-D-xylose synthase 2 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 389

 Score =  608 bits (1567), Expect = e-171
 Identities = 288/369 (78%), Positives = 332/369 (89%), Gaps = 3/369 (0%)
 Frame = +1

Query: 1    VSICMIGAGGFIGSHLCEKLMLETPHKVLALDVYNDKINHLLDK-ALPWAHRIEFHHMNI 177
            ++ICMIGAGGFIGSHLCEKLM ETPHKVLALDVYNDKI HLL+   + WA RI+FH +NI
Sbjct: 18   ITICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQWAGRIQFHRINI 77

Query: 178  KNDSRLETLVKASDLTINLAAICTPADYNTRPLDTIYSNFLDAIPVVKFCTENNKRLIHF 357
            K+DSRLE L+K +DLTINLAAICTPADYNTRPLDTIYSNF+DA+PVVK+C+ENNKRLIHF
Sbjct: 78   KHDSRLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137

Query: 358  STCEVFGKTIGSFLPQEY--RQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIY 531
            STCEV+GKTIGSFLP+++  RQDP++Y+LKED+SPCIFG + KQRWSYACAKQ+ +RL+Y
Sbjct: 138  STCEVYGKTIGSFLPKDHPLRQDPEFYVLKEDISPCIFGSIEKQRWSYACAKQLIERLVY 197

Query: 532  AEHAENGLKFTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGR 711
            AE AENGL+FTIVRP+NWIGPRMDFIPG+DGPS+GVPRVLACFSNNLLR EPLKLVDGG 
Sbjct: 198  AEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGE 257

Query: 712  SQRTFLYIKDAIEAVLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPA 891
            SQRTF+YIKDAIEAVLLMI+NPERANGHIFNVGNPNNE +V++LAE+M +VYAKVSG  A
Sbjct: 258  SQRTFIYIKDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGETA 317

Query: 892  SSLSTLDVSSMDFYGKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSH 1071
                T+DVSS +FYG+GYDDSD+RIPDMTII RQLGW P+T L +LL+ TL YQH TY+ 
Sbjct: 318  IESPTIDVSSKEFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLESTLTYQHTTYAE 377

Query: 1072 AIKKELSKP 1098
            AIKK  SKP
Sbjct: 378  AIKKATSKP 386


Top