BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025534
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   604   e-171
ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial...   588   e-166
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   587   e-165
ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|2...   586   e-165
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycin...   581   e-163

>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  604 bits (1558), Expect = e-171
 Identities = 289/337 (85%), Positives = 305/337 (90%)
 Frame = -2

Query: 1011 FDYTCAVIAYEMCIEEPTATVTNVRQQEKLKYPPHPLNTIELEKRASRYFRMSSEHTMKV 832
            FDYTCAVI YEMCI+EPTATVT VRQQEKLKYPPHPLNTIELEKRASRYF MSSEHTMKV
Sbjct: 263  FDYTCAVIIYEMCIQEPTATVTKVRQQEKLKYPPHPLNTIELEKRASRYFHMSSEHTMKV 322

Query: 831  AEELYQAGFISYPRTETDGFSSRTDLHAIVQEQQGHPEWGIYAQRLLDPGVGLWRNPRGG 652
            AE+LYQ GFISYPRTETD FS RTDLH IVQEQ GHP WG YAQRLLDPG GLWRNP  G
Sbjct: 323  AEDLYQTGFISYPRTETDYFSERTDLHGIVQEQLGHPIWGSYAQRLLDPGAGLWRNPSNG 382

Query: 651  GHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKPAVGAETTVEIDIAGEL 472
            GHDDKAHPPIHPTKFSAGESGWS DH++LYELVVRHFLACVS+PAVGAET VEIDIAGE 
Sbjct: 383  GHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHFLACVSQPAVGAETIVEIDIAGES 442

Query: 471  FSACGRVILEKNYLDVYHFESWGGSMIPTYTVGQQFIPTTLTLDPGVTKPPPLLSEADLL 292
            FS+ GRVI+ KNYLDVY FESWGGSMIPTY  GQQFIPTTLTLD GVT+PPPLLSEADLL
Sbjct: 443  FSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTTLTLDSGVTRPPPLLSEADLL 502

Query: 291  SCMDKEGIGTDATMHDHIKKLLDRFYATKDASTRFKPTNLGEALVMGYDDMGYKLWKPYL 112
            +CMDK GIGTDATMHDHIKKLLDRFYATKD++TRF PTNLGEALVMGYDDMGY+LWKPYL
Sbjct: 503  NCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNLGEALVMGYDDMGYELWKPYL 562

Query: 111  RAVMERDMKSVSEGNKSRAEVLATSLQQMKDCFLDAR 1
            R++ME DMK+VS G K R EVL T L+QMK CFLDAR
Sbjct: 563  RSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDAR 599


>ref|XP_004167550.1| PREDICTED: DNA topoisomerase 3-like, partial [Cucumis sativus]
          Length = 607

 Score =  588 bits (1515), Expect = e-166
 Identities = 281/337 (83%), Positives = 300/337 (89%)
 Frame = -2

Query: 1011 FDYTCAVIAYEMCIEEPTATVTNVRQQEKLKYPPHPLNTIELEKRASRYFRMSSEHTMKV 832
            FDYTCAV+ YEMC++E TATV NVR+QE LKYPPHPLNTIELEKRASRYFRMSSEHTMKV
Sbjct: 269  FDYTCAVVFYEMCVQESTATVVNVRRQETLKYPPHPLNTIELEKRASRYFRMSSEHTMKV 328

Query: 831  AEELYQAGFISYPRTETDGFSSRTDLHAIVQEQQGHPEWGIYAQRLLDPGVGLWRNPRGG 652
            AE+LYQAGFISYPRTETD FS RTDLH IV+EQQ H  WG YAQRLLDP   LWRNP GG
Sbjct: 329  AEDLYQAGFISYPRTETDCFSQRTDLHGIVREQQEHQIWGAYAQRLLDPESRLWRNPSGG 388

Query: 651  GHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKPAVGAETTVEIDIAGEL 472
            GHDDKAHPPIHPTKFSAGE GWS DH +LYELVVRHFLACVS+PAVGA TTVEIDIAGEL
Sbjct: 389  GHDDKAHPPIHPTKFSAGERGWSQDHHRLYELVVRHFLACVSQPAVGAVTTVEIDIAGEL 448

Query: 471  FSACGRVILEKNYLDVYHFESWGGSMIPTYTVGQQFIPTTLTLDPGVTKPPPLLSEADLL 292
            FS  GR+IL +NYLDVY FESWGGS IPTY  GQQF+PTTLTLD GVT+PPPLLSEADLL
Sbjct: 449  FSTSGRMILARNYLDVYRFESWGGSTIPTYVSGQQFVPTTLTLDSGVTRPPPLLSEADLL 508

Query: 291  SCMDKEGIGTDATMHDHIKKLLDRFYATKDASTRFKPTNLGEALVMGYDDMGYKLWKPYL 112
            SCMDKEGIGTDATMHDHIKKLLDRFYATKDA+TRF PTNLG+ALVMGYDDMGY LWKP L
Sbjct: 509  SCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPTNLGKALVMGYDDMGYNLWKPNL 568

Query: 111  RAVMERDMKSVSEGNKSRAEVLATSLQQMKDCFLDAR 1
            RA+ME +MK+VSEG K + EVLA+ LQQMK CFLD R
Sbjct: 569  RAIMEHEMKAVSEGTKRKDEVLASCLQQMKTCFLDVR 605


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  587 bits (1513), Expect = e-165
 Identities = 281/337 (83%), Positives = 304/337 (90%)
 Frame = -2

Query: 1011 FDYTCAVIAYEMCIEEPTATVTNVRQQEKLKYPPHPLNTIELEKRASRYFRMSSEHTMKV 832
            FDYT AVI YE+C+ EPTATVT V+Q+EK KYPP+PL+TIELEKRASRYF MSSE TMKV
Sbjct: 266  FDYTSAVILYELCVLEPTATVTKVQQKEKQKYPPYPLSTIELEKRASRYFHMSSEQTMKV 325

Query: 831  AEELYQAGFISYPRTETDGFSSRTDLHAIVQEQQGHPEWGIYAQRLLDPGVGLWRNPRGG 652
            AE+LYQ+GFISYPRTETDGFSSRTDLH IV++QQ HP WG YAQRLLDPG GLWRNP  G
Sbjct: 326  AEDLYQSGFISYPRTETDGFSSRTDLHTIVRDQQAHPIWGSYAQRLLDPGTGLWRNPSTG 385

Query: 651  GHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKPAVGAETTVEIDIAGEL 472
            GHDDKAHPPIHPTKFS GE+GWS DH ++YELVVRHFLACVS+PAVGAETTVEIDIAGE 
Sbjct: 386  GHDDKAHPPIHPTKFSPGETGWSQDHHRVYELVVRHFLACVSQPAVGAETTVEIDIAGEQ 445

Query: 471  FSACGRVILEKNYLDVYHFESWGGSMIPTYTVGQQFIPTTLTLDPGVTKPPPLLSEADLL 292
            FSA GRVIL KNYLDVY FESWGGSMIPTY  GQQF+PTTLTLD GVT+PPPLLSE+DLL
Sbjct: 446  FSASGRVILAKNYLDVYRFESWGGSMIPTYVHGQQFMPTTLTLDSGVTRPPPLLSESDLL 505

Query: 291  SCMDKEGIGTDATMHDHIKKLLDRFYATKDASTRFKPTNLGEALVMGYDDMGYKLWKPYL 112
            SCMDK GIGTDATMHDHIKKLLDRFYATKDA+TRF PTNLGEALVMGYDDMGY+LWKP L
Sbjct: 506  SCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGEALVMGYDDMGYELWKPNL 565

Query: 111  RAVMERDMKSVSEGNKSRAEVLATSLQQMKDCFLDAR 1
            R++ME DMK VS G+KS+AEVL T LQQMK CFLDAR
Sbjct: 566  RSMMEYDMKEVSMGHKSKAEVLETCLQQMKTCFLDAR 602


>ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|222856496|gb|EEE94043.1|
            predicted protein [Populus trichocarpa]
          Length = 910

 Score =  586 bits (1511), Expect = e-165
 Identities = 286/338 (84%), Positives = 301/338 (89%), Gaps = 1/338 (0%)
 Frame = -2

Query: 1011 FDYTCAVIAYEMCIEEPTATVTNVR-QQEKLKYPPHPLNTIELEKRASRYFRMSSEHTMK 835
            FDYT +VI YEMC+EEPTATV+N   QQEKLKYPP+PL+TIELEKRASRYFRMSSE TMK
Sbjct: 263  FDYTSSVILYEMCVEEPTATVSNRNHQQEKLKYPPYPLSTIELEKRASRYFRMSSEQTMK 322

Query: 834  VAEELYQAGFISYPRTETDGFSSRTDLHAIVQEQQGHPEWGIYAQRLLDPGVGLWRNPRG 655
            VAE+LYQAGFISYPRTETD FSSRTDLH IVQE Q HP WG YAQRLLDPG GLWRNP  
Sbjct: 323  VAEDLYQAGFISYPRTETDSFSSRTDLHTIVQEHQEHPVWGSYAQRLLDPGAGLWRNPSN 382

Query: 654  GGHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKPAVGAETTVEIDIAGE 475
            GGHDDKAHPPIHPTKFSAGES WS DH +LYELVVRHFLACVS+PAVGAET VEIDIAGE
Sbjct: 383  GGHDDKAHPPIHPTKFSAGESRWSQDHHRLYELVVRHFLACVSQPAVGAETVVEIDIAGE 442

Query: 474  LFSACGRVILEKNYLDVYHFESWGGSMIPTYTVGQQFIPTTLTLDPGVTKPPPLLSEADL 295
             FSA GRVIL KNYLDVY FESWG SMIPTY  GQQFIP TLTLD GVT+PPPLLSEADL
Sbjct: 443  RFSASGRVILAKNYLDVYRFESWGDSMIPTYLQGQQFIPATLTLDSGVTRPPPLLSEADL 502

Query: 294  LSCMDKEGIGTDATMHDHIKKLLDRFYATKDASTRFKPTNLGEALVMGYDDMGYKLWKPY 115
            LSCMDK GIGTDATMHDHIKKLLDRFY TKDA+TRF PTNLGEALVMGYDDMGY+LWKP 
Sbjct: 503  LSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANTRFSPTNLGEALVMGYDDMGYELWKPN 562

Query: 114  LRAVMERDMKSVSEGNKSRAEVLATSLQQMKDCFLDAR 1
            LR++ME DMK VS GNKS+AEVLAT LQQMK CFLDA+
Sbjct: 563  LRSLMECDMKEVSVGNKSKAEVLATCLQQMKACFLDAK 600


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycine max]
          Length = 913

 Score =  581 bits (1497), Expect = e-163
 Identities = 283/341 (82%), Positives = 306/341 (89%), Gaps = 4/341 (1%)
 Frame = -2

Query: 1011 FDYTCAVIAYEMCIEEPTATVTNVRQQEKLKYPPHPLNTIELEKRASRYFRMSSEHTMKV 832
            FDYTCAVI YEMC+EEPTATVTN+RQQEK KYPP PLNTIEL+KRASRYFRMSS+HTMKV
Sbjct: 264  FDYTCAVIIYEMCVEEPTATVTNIRQQEKPKYPPFPLNTIELQKRASRYFRMSSDHTMKV 323

Query: 831  AEELYQAGFISYPRTETDGFSSRTDLHAIVQEQQGHPEWGIYAQRLLDPGVGLWRNPRGG 652
            AEELYQAGFISYPRTETD FS  TDLH IVQEQQGHPEWGIYAQRL+DP  GLWRNPRGG
Sbjct: 324  AEELYQAGFISYPRTETDSFSPGTDLHTIVQEQQGHPEWGIYAQRLMDPEAGLWRNPRGG 383

Query: 651  GHDDKAHPPIHPTKFSAGESGWSHDHRKLYELVVRHFLACVSKPAVGAETTVEIDIAGEL 472
            GHDDKAHPPI+PTKFS GESGWS DHRKLYELVVRHFLACVSKPA+GAETTVEI+IAGEL
Sbjct: 384  GHDDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHFLACVSKPALGAETTVEINIAGEL 443

Query: 471  FSACGRVILEKNYLDVYHFESWGGSMIPTYTVGQQFIPTTLTLDPGVTKPPPLLSEADLL 292
            FSACGRVILEKNYLDVY +ESWGGSMIPTYT GQQF PT LTL+ GVT+PPPLLSEADLL
Sbjct: 444  FSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTKLTLESGVTRPPPLLSEADLL 503

Query: 291  SCMDKE--GIGTDATMHDHIKKLLDRFYATKDASTRFKPTNLGEALVMGYD--DMGYKLW 124
            S MD+E   IGTDATM DHIKK+LDR YATKD+STRF PTNLGEALV+GYD  DM YKLW
Sbjct: 504  SYMDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRFTPTNLGEALVLGYDDIDMTYKLW 563

Query: 123  KPYLRAVMERDMKSVSEGNKSRAEVLATSLQQMKDCFLDAR 1
            KP LR+ ME+ M  V +G+KS+AEVL T LQ+M+ CFL+AR
Sbjct: 564  KPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLEAR 604