BLASTX nr result

ID: Glycyrrhiza24_contig00025517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00025517
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34496.1| unknown [Medicago truncatula]                          171   6e-41
ref|XP_002523906.1| RNA-binding region-containing protein, putat...   165   4e-39
ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|1...   160   1e-37
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265...   160   1e-37

>gb|AFK34496.1| unknown [Medicago truncatula]
          Length = 256

 Score =  171 bits (433), Expect = 6e-41
 Identities = 100/157 (63%), Positives = 109/157 (69%), Gaps = 11/157 (7%)
 Frame = -3

Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259
           T+TKVFVGGLAWETPKD LR HFEKYG+ILEAVIISDK+TG+SKGYGFVTF         
Sbjct: 16  TLTKVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTFKDADSAKKA 75

Query: 258 XXEPTVMINGRRANCNLASLGARRPKS----PPQQHTVL--TQGLGTRN--GNQLQQVQW 103
             EPTV+INGRRANCN+ASLGARRP+S    PP     L  TQG GT+N      QQVQW
Sbjct: 76  CEEPTVIINGRRANCNIASLGARRPRSSPITPPPSPPPLPYTQG-GTKNIHRRNQQQVQW 134

Query: 102 YYPVV--GTXXXXXXXXXXXXFYGYTPTYIATD-INY 1
           YYPVV                FYGYTPTYIATD +NY
Sbjct: 135 YYPVVTPTPPSSIFHHHHALPFYGYTPTYIATDHMNY 171


>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score =  165 bits (417), Expect = 4e-39
 Identities = 91/159 (57%), Positives = 103/159 (64%), Gaps = 13/159 (8%)
 Frame = -3

Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259
           T+TKVFVGGLAWETPK+A+R HFEKYGEILEAVIISDKLTG+SKGYGFVTF         
Sbjct: 14  TLTKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKLTGRSKGYGFVTFKEPEAAKKA 73

Query: 258 XXEPTVMINGRRANCNLASLGARRPKS-----PPQQHTVLTQGLGTRNGNQ------LQQ 112
             + T MINGRRANCNLASLGARRP+S     PPQ         G+ +G +         
Sbjct: 74  CEDATPMINGRRANCNLASLGARRPRSATQAPPPQPPPPPPPQQGSNHGQRPSSAAPANH 133

Query: 111 VQWYYPV--VGTXXXXXXXXXXXXFYGYTPTYIATDINY 1
           VQWYYP     +            FYGYTPTY+ATDI+Y
Sbjct: 134 VQWYYPAGSPASPYHHHHHHQAVPFYGYTPTYVATDISY 172


>ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|222851860|gb|EEE89407.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score =  164 bits (414), Expect = 9e-39
 Identities = 88/152 (57%), Positives = 99/152 (65%), Gaps = 6/152 (3%)
 Frame = -3

Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259
           T+TKVFVGGLAWETPK+ALR HFEKYGEILEAVIISDK+TG+SKGYGFVTF         
Sbjct: 14  TLTKVFVGGLAWETPKEALREHFEKYGEILEAVIISDKITGRSKGYGFVTFKEAGAANKA 73

Query: 258 XXEPTVMINGRRANCNLASLGARRPKS----PPQQHTVLTQGLGTRNGNQLQQVQWYYPV 91
             +   +INGRRANCNLASLGARRP+S    PPQQ   +  G  +        VQWYYP 
Sbjct: 74  CEDAAPIINGRRANCNLASLGARRPRSSTPAPPQQGPNIIAGPRSTPAPPANHVQWYYPA 133

Query: 90  --VGTXXXXXXXXXXXXFYGYTPTYIATDINY 1
                            FYGY+P YIATDI+Y
Sbjct: 134 GSAAASPFHHQHHQAVPFYGYSPAYIATDISY 165


>ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|118481097|gb|ABK92502.1|
           unknown [Populus trichocarpa]
           gi|222864314|gb|EEF01445.1| predicted protein [Populus
           trichocarpa]
          Length = 253

 Score =  160 bits (405), Expect = 1e-37
 Identities = 86/150 (57%), Positives = 97/150 (64%), Gaps = 7/150 (4%)
 Frame = -3

Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259
           T+TKVFVGGLAWETPKDA+R HFEKYGEILEAVIISDK+TG+SKGYGFVTF         
Sbjct: 15  TLTKVFVGGLAWETPKDAMREHFEKYGEILEAVIISDKITGRSKGYGFVTFKEAESAKKA 74

Query: 258 XXEPTVMINGRRANCNLASLGARRPKS----PPQQHTVLTQGLGTRNGNQLQQVQWYYP- 94
             + + +INGRRANCNLASLGARRP+S    PPQQ   +  G  +        VQWYYP 
Sbjct: 75  CEDASPIINGRRANCNLASLGARRPRSATPAPPQQGPNINAGPRSTPAAPANHVQWYYPA 134

Query: 93  --VVGTXXXXXXXXXXXXFYGYTPTYIATD 10
                             FYGY+P YIATD
Sbjct: 135 GSAAAASPFHHQHHQAVPFYGYSPAYIATD 164


>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
          Length = 254

 Score =  160 bits (404), Expect = 1e-37
 Identities = 88/152 (57%), Positives = 99/152 (65%), Gaps = 6/152 (3%)
 Frame = -3

Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259
           T+TKVFVGGLAWETPK+A+R+HFEKYGEILEAVIISDKLTG+SKGYGFVTF         
Sbjct: 14  TLTKVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFVTFKEPEAAKKA 73

Query: 258 XXEPTVMINGRRANCNLASLGARRPKS-----PPQQHTVLTQGLGTRNGNQLQQVQWYYP 94
             + T MINGRRANCNLASLGARRP+S     PP Q +    G    +      VQWYYP
Sbjct: 74  CEDATPMINGRRANCNLASLGARRPRSAASSTPPHQGS--NGGSRPTSAAPASHVQWYYP 131

Query: 93  V-VGTXXXXXXXXXXXXFYGYTPTYIATDINY 1
                            FYGY+P YIA DI+Y
Sbjct: 132 AGTPAPPFHHQHHQAVPFYGYSPAYIAADISY 163


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