BLASTX nr result
ID: Glycyrrhiza24_contig00025517
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00025517 (440 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK34496.1| unknown [Medicago truncatula] 171 6e-41 ref|XP_002523906.1| RNA-binding region-containing protein, putat... 165 4e-39 ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|2... 164 9e-39 ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|1... 160 1e-37 ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265... 160 1e-37 >gb|AFK34496.1| unknown [Medicago truncatula] Length = 256 Score = 171 bits (433), Expect = 6e-41 Identities = 100/157 (63%), Positives = 109/157 (69%), Gaps = 11/157 (7%) Frame = -3 Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259 T+TKVFVGGLAWETPKD LR HFEKYG+ILEAVIISDK+TG+SKGYGFVTF Sbjct: 16 TLTKVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKGYGFVTFKDADSAKKA 75 Query: 258 XXEPTVMINGRRANCNLASLGARRPKS----PPQQHTVL--TQGLGTRN--GNQLQQVQW 103 EPTV+INGRRANCN+ASLGARRP+S PP L TQG GT+N QQVQW Sbjct: 76 CEEPTVIINGRRANCNIASLGARRPRSSPITPPPSPPPLPYTQG-GTKNIHRRNQQQVQW 134 Query: 102 YYPVV--GTXXXXXXXXXXXXFYGYTPTYIATD-INY 1 YYPVV FYGYTPTYIATD +NY Sbjct: 135 YYPVVTPTPPSSIFHHHHALPFYGYTPTYIATDHMNY 171 >ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis] gi|223536836|gb|EEF38475.1| RNA-binding region-containing protein, putative [Ricinus communis] Length = 256 Score = 165 bits (417), Expect = 4e-39 Identities = 91/159 (57%), Positives = 103/159 (64%), Gaps = 13/159 (8%) Frame = -3 Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259 T+TKVFVGGLAWETPK+A+R HFEKYGEILEAVIISDKLTG+SKGYGFVTF Sbjct: 14 TLTKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKLTGRSKGYGFVTFKEPEAAKKA 73 Query: 258 XXEPTVMINGRRANCNLASLGARRPKS-----PPQQHTVLTQGLGTRNGNQ------LQQ 112 + T MINGRRANCNLASLGARRP+S PPQ G+ +G + Sbjct: 74 CEDATPMINGRRANCNLASLGARRPRSATQAPPPQPPPPPPPQQGSNHGQRPSSAAPANH 133 Query: 111 VQWYYPV--VGTXXXXXXXXXXXXFYGYTPTYIATDINY 1 VQWYYP + FYGYTPTY+ATDI+Y Sbjct: 134 VQWYYPAGSPASPYHHHHHHQAVPFYGYTPTYVATDISY 172 >ref|XP_002312040.1| predicted protein [Populus trichocarpa] gi|222851860|gb|EEE89407.1| predicted protein [Populus trichocarpa] Length = 251 Score = 164 bits (414), Expect = 9e-39 Identities = 88/152 (57%), Positives = 99/152 (65%), Gaps = 6/152 (3%) Frame = -3 Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259 T+TKVFVGGLAWETPK+ALR HFEKYGEILEAVIISDK+TG+SKGYGFVTF Sbjct: 14 TLTKVFVGGLAWETPKEALREHFEKYGEILEAVIISDKITGRSKGYGFVTFKEAGAANKA 73 Query: 258 XXEPTVMINGRRANCNLASLGARRPKS----PPQQHTVLTQGLGTRNGNQLQQVQWYYPV 91 + +INGRRANCNLASLGARRP+S PPQQ + G + VQWYYP Sbjct: 74 CEDAAPIINGRRANCNLASLGARRPRSSTPAPPQQGPNIIAGPRSTPAPPANHVQWYYPA 133 Query: 90 --VGTXXXXXXXXXXXXFYGYTPTYIATDINY 1 FYGY+P YIATDI+Y Sbjct: 134 GSAAASPFHHQHHQAVPFYGYSPAYIATDISY 165 >ref|XP_002315274.1| predicted protein [Populus trichocarpa] gi|118481097|gb|ABK92502.1| unknown [Populus trichocarpa] gi|222864314|gb|EEF01445.1| predicted protein [Populus trichocarpa] Length = 253 Score = 160 bits (405), Expect = 1e-37 Identities = 86/150 (57%), Positives = 97/150 (64%), Gaps = 7/150 (4%) Frame = -3 Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259 T+TKVFVGGLAWETPKDA+R HFEKYGEILEAVIISDK+TG+SKGYGFVTF Sbjct: 15 TLTKVFVGGLAWETPKDAMREHFEKYGEILEAVIISDKITGRSKGYGFVTFKEAESAKKA 74 Query: 258 XXEPTVMINGRRANCNLASLGARRPKS----PPQQHTVLTQGLGTRNGNQLQQVQWYYP- 94 + + +INGRRANCNLASLGARRP+S PPQQ + G + VQWYYP Sbjct: 75 CEDASPIINGRRANCNLASLGARRPRSATPAPPQQGPNINAGPRSTPAAPANHVQWYYPA 134 Query: 93 --VVGTXXXXXXXXXXXXFYGYTPTYIATD 10 FYGY+P YIATD Sbjct: 135 GSAAAASPFHHQHHQAVPFYGYSPAYIATD 164 >ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera] Length = 254 Score = 160 bits (404), Expect = 1e-37 Identities = 88/152 (57%), Positives = 99/152 (65%), Gaps = 6/152 (3%) Frame = -3 Query: 438 TMTKVFVGGLAWETPKDALRNHFEKYGEILEAVIISDKLTGKSKGYGFVTFXXXXXXXXX 259 T+TKVFVGGLAWETPK+A+R+HFEKYGEILEAVIISDKLTG+SKGYGFVTF Sbjct: 14 TLTKVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFVTFKEPEAAKKA 73 Query: 258 XXEPTVMINGRRANCNLASLGARRPKS-----PPQQHTVLTQGLGTRNGNQLQQVQWYYP 94 + T MINGRRANCNLASLGARRP+S PP Q + G + VQWYYP Sbjct: 74 CEDATPMINGRRANCNLASLGARRPRSAASSTPPHQGS--NGGSRPTSAAPASHVQWYYP 131 Query: 93 V-VGTXXXXXXXXXXXXFYGYTPTYIATDINY 1 FYGY+P YIA DI+Y Sbjct: 132 AGTPAPPFHHQHHQAVPFYGYSPAYIAADISY 163